Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40318
         (613 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54QY5 Cluster: Putative uncharacterized protein; n=1; ...    27   4.8  
UniRef50_Q8RID9 Cluster: Putative uncharacterized protein FN1662...    33   5.3  
UniRef50_A7IYF6 Cluster: Gp89; n=1; Corynebacterium phage P1201|...    33   5.3  
UniRef50_Q32RR9 Cluster: Cell division protein; n=1; Staurastrum...    33   7.1  

>UniRef50_Q54QY5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 273

 Score = 27.5 bits (58), Expect(2) = 4.8
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 407 VNVNIYHFYHHMYH 448
           +N+N+YH +HH +H
Sbjct: 119 LNINLYHHHHHHHH 132



 Score = 24.6 bits (51), Expect(2) = 4.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 422 YHFYHHMYHSQKILLFFLLNVIMKM 496
           +H +HH +H    +  FL+  ++K+
Sbjct: 131 HHHHHHHHHHHHHVNMFLIGTLLKL 155


>UniRef50_Q8RID9 Cluster: Putative uncharacterized protein FN1662;
           n=1; Fusobacterium nucleatum subsp. nucleatum|Rep:
           Putative uncharacterized protein FN1662 - Fusobacterium
           nucleatum subsp. nucleatum
          Length = 484

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -1

Query: 226 EIYIFYKISFLHIIMFSINLDVYLTSRKGRKLKFYN-LTKLSLHRLLERKR 77
           E Y FYK+  L  ++ + NL  +   RK  ++  YN +TK S+   LE K+
Sbjct: 215 ENYKFYKVKALGALLLAHNLKDFNLERKAVRIVIYNGITKSSIREQLEGKK 265


>UniRef50_A7IYF6 Cluster: Gp89; n=1; Corynebacterium phage
           P1201|Rep: Gp89 - Corynebacterium phage P1201
          Length = 86

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 268 FVSELYRHLQKFICEIYIFYKISFLHIIMFSINLDVYL 155
           ++S LY ++  FIC ++IFY + F+  I + + +  YL
Sbjct: 6   YISMLYIYVLLFICNLFIFYYLLFIFYIYYLLFIIYYL 43


>UniRef50_Q32RR9 Cluster: Cell division protein; n=1; Staurastrum
           punctulatum|Rep: Cell division protein - Staurastrum
           punctulatum (Green alga)
          Length = 1750

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 17/64 (26%), Positives = 35/64 (54%)
 Frame = -1

Query: 334 EKFDQSRSKPERYVH*CFVLVSFVSELYRHLQKFICEIYIFYKISFLHIIMFSINLDVYL 155
           EK   SRS    + +  F+L   VSE++  + K    +Y F+ +  + +++F +N ++ L
Sbjct: 87  EKIKNSRSTILLFFNIPFILSFLVSEIFESIIKKTIYLYRFFLLLSVPVLIFFVNRNLLL 146

Query: 154 TSRK 143
            ++K
Sbjct: 147 QNKK 150


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,710,342
Number of Sequences: 1657284
Number of extensions: 9014066
Number of successful extensions: 21848
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21819
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)