Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40318
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.88 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 249 VIFKNLFVRYTYFIRFLFYILLC 181
           +IF   F+  TY+  + F ILLC
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLC 112



 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 386 Y*SYAF*VNVNIYHFYHHMYHSQKILLFFL 475
           Y  YAF + + +Y+FY+        LLF L
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFLL 131


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 419 IYHFYHHMYHSQKILLFFLLNVIMK 493
           + H+Y  M  S K+L  FL+  ++K
Sbjct: 164 LIHWYPRMLISTKLLAHFLILTVLK 188


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 419 IYHFYHHMYHSQKILLFFLLNVIMK 493
           + H+Y  M  S K+L  FL+  ++K
Sbjct: 164 LIHWYPRMLISTKLLAHFLILTVLK 188


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 283 FVLVSFVSELYRHLQKFICEIYIFYKISFLHIIMFS 176
           F LVS +  L   L+  + +    + ISFL II +S
Sbjct: 176 FYLVSKIESLACELKNTVDDFNDIFGISFLLIISYS 211


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +1

Query: 370 LAHIGILVLCVLSKCKYLPLLPPYVPFTKNITFFFIKCH 486
           +AH+  LV+ VL+   ++  +  ++ FTK +   F++ +
Sbjct: 120 VAHLLFLVIFVLNIWCWIVEIGGWLAFTKQLLIKFVEVY 158


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 246 IFKNLFVRYTYFIRFLFYILLCF 178
           I KNL+    + I  L+ + LC+
Sbjct: 95  IRKNLYYLLLFVINVLYVLTLCY 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,900
Number of Sequences: 336
Number of extensions: 2985
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)