Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40318
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001804-1|AAN71559.1|  102|Drosophila melanogaster RH30043p pro...    31   1.6  
L08133-1|AAA21141.1|  917|Drosophila melanogaster bride of seven...    28   8.6  

>BT001804-1|AAN71559.1|  102|Drosophila melanogaster RH30043p
           protein.
          Length = 102

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +1

Query: 286 ISVHSAQVCFLIDQTFLVL*FKMLCQIHLAHIGILV---LCVLSKCKYLPLLPPYVPFTK 456
           +S+H    C L+   FLV  F  +   H A +  ++   L V++   YLP L    PF  
Sbjct: 7   LSLHQHNHCLLLFLLFLVASFSCIFVRHFALLPFVLAKQLLVMAYGYYLPFLVSRSPFFG 66

Query: 457 NITFFFIK 480
            I  +F+K
Sbjct: 67  LIHLYFLK 74


>L08133-1|AAA21141.1|  917|Drosophila melanogaster bride of
           sevenless protein.
          Length = 917

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 235 IFEDDDIIHLQNLPKQSISVHSAQVCFLIDQTFLVL 342
           +F+DDDI HL  +   S+   +A +C L+   F VL
Sbjct: 17  VFKDDDIFHLIRIRFNSLLSSAALLCILV-TVFCVL 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,459,581
Number of Sequences: 53049
Number of extensions: 400637
Number of successful extensions: 765
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)