Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40318
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   1.8  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   3.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   3.1  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   5.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   5.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   5.4  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   7.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.5  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -1

Query: 205 ISFLHIIMFSINLDVYLTSRKGRKLKFYNLTKLSLHRL 92
           +S +   M  +N  VY+   KG  L  Y  +  S HRL
Sbjct: 190 VSLVVQAMDPVNTIVYMADDKGDALIVYQNSDESFHRL 227


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 172 NLDVYLTSRKGRKLKFYNLTKLSLHRL 92
           N  VY+   KG  L  Y  +  S HRL
Sbjct: 203 NTMVYIADEKGEGLIMYQNSDDSFHRL 229


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 205 ISFLHIIMFSINLDVYLTSRKGRKLKFYNLTKLSLHRLLER 83
           +S +   M  +N  VY+   +G  L  Y  +  S HRL  +
Sbjct: 190 VSLVVQAMDPMNTTVYIADDRGDALIIYQNSDDSFHRLTSK 230


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 163 VYLTSRKGRKLKFYNLTKLSLHRL 92
           VY+   KG  L  Y+ +  S HRL
Sbjct: 203 VYIADEKGEGLIVYHNSDDSFHRL 226


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 163 VYLTSRKGRKLKFYNLTKLSLHRL 92
           VY+   KG  L  Y+ +  S HRL
Sbjct: 203 VYIADEKGEGLIVYHNSDDSFHRL 226


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 163 VYLTSRKGRKLKFYNLTKLSLHRL 92
           VY+   KG  L  Y+ +  S HRL
Sbjct: 203 VYIADEKGEGLIVYHNSDDSFHRL 226


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 419 IYHFYHHMYHSQ 454
           IY  +HH++H Q
Sbjct: 69  IYQSHHHLHHHQ 80


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 516 IIKLYEYFDVC 548
           I KLY YFD C
Sbjct: 458 IDKLYTYFDKC 468


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 516 IIKLYEYFDVC 548
           I KLY YFD C
Sbjct: 458 IDKLYTYFDKC 468


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -1

Query: 172 NLDVYLTSRKGRKLKFYNLTKLSLHRL 92
           N  VY+   KG  L  Y     S HRL
Sbjct: 198 NTLVYMADHKGDALIVYQNADDSFHRL 224


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,651
Number of Sequences: 438
Number of extensions: 3417
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)