Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40317
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.064
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   2.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.6  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   7.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   9.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   9.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.064
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -1

Query: 545 ISFLDCLCMHL*GLHLVIFCILINLSIEFLLHVAFFLFRSKLPICI 408
           +  L  LC     +HL+ +C  I  ++ FLL   +F +   + +C+
Sbjct: 68  VHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCV 113



 Score = 27.1 bits (57), Expect = 0.15
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 506 LHLVIFCILINLSIEFLLHVAFFLFRSKLPICI 408
           +HL+ +C+LI L   +  + AF LF   L + +
Sbjct: 224 IHLLFYCVLIILLCIYYFYYAFILFTVHLLLLV 256


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 384 HELTGIQHVHKTSSKPHA**NLFHISVF 301
           HE+  +QH+H++   PH    L H+  F
Sbjct: 107 HEIK-LQHLHQSKFNPHEEVKLQHLHQF 133


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 281 RTSFR*ANTEIWNRFH 328
           +T  + AN E+W++FH
Sbjct: 18  KTKAQLANKELWDQFH 33


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 450 MQQEFYGEIYKNTKDD 497
           + QE YGE YK+  +D
Sbjct: 293 ISQEEYGEFYKSLTND 308


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 549 ADFISGLSLYASLRSSPCHLLYSYKSLHRIL 457
           +DF++G +L+ S R       Y    + RIL
Sbjct: 17  SDFVNGKTLHRSTRDDKYTTRYDNVDVDRIL 47


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 291 SVKRILKYGTDFIRH 335
           SVKR +K+ T+F R+
Sbjct: 448 SVKRFVKFWTNFARN 462


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 291 SVKRILKYGTDFIRH 335
           SVKR +K+ T+F R+
Sbjct: 450 SVKRFVKFWTNFARN 464


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 291 SVKRILKYGTDFIRH 335
           SVKR +K+ T+F R+
Sbjct: 448 SVKRFVKFWTNFARN 462


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 291 SVKRILKYGTDFIRH 335
           SVKR +K+ T+F R+
Sbjct: 450 SVKRFVKFWTNFARN 464


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 473 LSIEFLLHVAFFLFRSKLPI 414
           L I FLL   FFL  S +PI
Sbjct: 564 LVIPFLLFGGFFLNVSSIPI 583


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 473 LSIEFLLHVAFFLFRSKLPI 414
           L I FLL   FFL  S +PI
Sbjct: 564 LVIPFLLFGGFFLNVSSIPI 583


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,218
Number of Sequences: 336
Number of extensions: 3841
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)