Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40317
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132165-1|AAD34753.1|  737|Drosophila melanogaster unknown prot...    87   3e-17
AF017777-4|AAC28403.1|  737|Drosophila melanogaster penguin prot...    87   3e-17
AE014298-3120|AAF50828.1|  737|Drosophila melanogaster CG1685-PA...    87   3e-17
BT003527-1|AAO39531.1|  729|Drosophila melanogaster RE22018p pro...    29   8.1  
AY251387-1|AAP51207.1|  729|Drosophila melanogaster tripartite m...    29   8.1  
AE014134-1916|AAF52977.3|  729|Drosophila melanogaster CG31721-P...    29   8.1  

>AF132165-1|AAD34753.1|  737|Drosophila melanogaster unknown
           protein.
          Length = 737

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 45/145 (31%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
 Frame = +3

Query: 234 NERASRHIVQMGQSKYAHHSVKRILKYGTDFIRHEVLKKFYGHVVSLSTHAISAPVLDYA 413
           +E+     V+M QSKYA   V+R+LKYG    + +++   YGH+V L+ H+I + +LD  
Sbjct: 201 SEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLYGHIVRLAGHSIGSGLLDSM 260

Query: 414 YGEFASKKEKCHMQQEFYGEIYKNTKDDKVKT-SEMHTKTVQK*NRLYSRPVSKLTEDIR 590
           Y + A+  ++ +M+QEFYG++Y+  KD  VKT S+ + +       +     + L     
Sbjct: 261 Y-QSATPNQRIYMRQEFYGDLYRKAKDSNVKTLSDTYKEATNMKASILGSVKANLDHVAN 319

Query: 591 QKPT*WRIVHSVLYDYICECSQKIE 665
           ++     +VH+V+ +Y+  C +  E
Sbjct: 320 KQLVDSALVHAVMLEYLRACDEDEE 344



 Score = 32.3 bits (70), Expect = 0.66
 Identities = 19/85 (22%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
 Frame = +1

Query: 1   VRRKAKITAEVFEISHKAKLLAAQIQRKVVKSDFRTNSCKELHNMLK--GQYKSIALTHD 174
           ++ K K   + +EIS +A  +  +++ +  +++ +    ++++ +L        +   HD
Sbjct: 123 LKLKRKSAKDTYEISKEANQIHEKLRCR--RTENKDKLVEQIYKVLNVGDTISKVVKAHD 180

Query: 175 LSRVIQVLLKHSPEDIINEITKELL 249
            +RVIQ +LK++   +  EI+++LL
Sbjct: 181 TARVIQSMLKYASPALRAEISEKLL 205


>AF017777-4|AAC28403.1|  737|Drosophila melanogaster penguin
           protein.
          Length = 737

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 45/145 (31%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
 Frame = +3

Query: 234 NERASRHIVQMGQSKYAHHSVKRILKYGTDFIRHEVLKKFYGHVVSLSTHAISAPVLDYA 413
           +E+     V+M QSKYA   V+R+LKYG    + +++   YGH+V L+ H+I + +LD  
Sbjct: 201 SEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLYGHIVRLAGHSIGSGLLDSM 260

Query: 414 YGEFASKKEKCHMQQEFYGEIYKNTKDDKVKT-SEMHTKTVQK*NRLYSRPVSKLTEDIR 590
           Y + A+  ++ +M+QEFYG++Y+  KD  VKT S+ + +       +     + L     
Sbjct: 261 Y-QSATPNQRIYMRQEFYGDLYRKAKDSNVKTLSDTYKEATNMKASILGSVKANLDHVAN 319

Query: 591 QKPT*WRIVHSVLYDYICECSQKIE 665
           ++     +VH+V+ +Y+  C +  E
Sbjct: 320 KQLVDSALVHAVMLEYLRACDEDEE 344



 Score = 32.3 bits (70), Expect = 0.66
 Identities = 19/85 (22%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
 Frame = +1

Query: 1   VRRKAKITAEVFEISHKAKLLAAQIQRKVVKSDFRTNSCKELHNMLK--GQYKSIALTHD 174
           ++ K K   + +EIS +A  +  +++ +  +++ +    ++++ +L        +   HD
Sbjct: 123 LKLKRKSAKDTYEISKEANQIHEKLRCR--RTENKDKLVEQIYKVLNVGDTISKVVKAHD 180

Query: 175 LSRVIQVLLKHSPEDIINEITKELL 249
            +RVIQ +LK++   +  EI+++LL
Sbjct: 181 TARVIQSMLKYASPALRAEISEKLL 205


>AE014298-3120|AAF50828.1|  737|Drosophila melanogaster CG1685-PA
           protein.
          Length = 737

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 45/145 (31%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
 Frame = +3

Query: 234 NERASRHIVQMGQSKYAHHSVKRILKYGTDFIRHEVLKKFYGHVVSLSTHAISAPVLDYA 413
           +E+     V+M QSKYA   V+R+LKYG    + +++   YGH+V L+ H+I + +LD  
Sbjct: 201 SEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLYGHIVRLAGHSIGSGLLDSM 260

Query: 414 YGEFASKKEKCHMQQEFYGEIYKNTKDDKVKT-SEMHTKTVQK*NRLYSRPVSKLTEDIR 590
           Y + A+  ++ +M+QEFYG++Y+  KD  VKT S+ + +       +     + L     
Sbjct: 261 Y-QSATPNQRIYMRQEFYGDLYRKAKDSNVKTLSDTYKEATNMKASILGSVKANLDHVAN 319

Query: 591 QKPT*WRIVHSVLYDYICECSQKIE 665
           ++     +VH+V+ +Y+  C +  E
Sbjct: 320 KQLVDSALVHAVMLEYLRACDEDEE 344



 Score = 32.3 bits (70), Expect = 0.66
 Identities = 19/85 (22%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
 Frame = +1

Query: 1   VRRKAKITAEVFEISHKAKLLAAQIQRKVVKSDFRTNSCKELHNMLK--GQYKSIALTHD 174
           ++ K K   + +EIS +A  +  +++ +  +++ +    ++++ +L        +   HD
Sbjct: 123 LKLKRKSAKDTYEISKEANQIHEKLRCR--RTENKDKLVEQIYKVLNVGDTISKVVKAHD 180

Query: 175 LSRVIQVLLKHSPEDIINEITKELL 249
            +RVIQ +LK++   +  EI+++LL
Sbjct: 181 TARVIQSMLKYASPALRAEISEKLL 205


>BT003527-1|AAO39531.1|  729|Drosophila melanogaster RE22018p
           protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 7   RKAKITAEVFEISHKAKLLAAQIQRKVVKSDFRTNSCKELHNMLKGQYKS-IALTHD 174
           +K +++  + ++S KA+     IQR    SD  T SC E   ++  Q ++ I   HD
Sbjct: 298 QKTELSHNLQQLSEKARSTTEFIQRLKGMSDKVTESCMEFERLVHAQCEALIQAIHD 354


>AY251387-1|AAP51207.1|  729|Drosophila melanogaster tripartite
           motif protein 9 protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 7   RKAKITAEVFEISHKAKLLAAQIQRKVVKSDFRTNSCKELHNMLKGQYKS-IALTHD 174
           +K +++  + ++S KA+     IQR    SD  T SC E   ++  Q ++ I   HD
Sbjct: 298 QKTELSHNLQQLSEKARSTTEFIQRLKGMSDKVTESCMEFERLVHAQCEALIQAIHD 354


>AE014134-1916|AAF52977.3|  729|Drosophila melanogaster CG31721-PA
           protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 7   RKAKITAEVFEISHKAKLLAAQIQRKVVKSDFRTNSCKELHNMLKGQYKS-IALTHD 174
           +K +++  + ++S KA+     IQR    SD  T SC E   ++  Q ++ I   HD
Sbjct: 298 QKTELSHNLQQLSEKARSTTEFIQRLKGMSDKVTESCMEFERLVHAQCEALIQAIHD 354


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,621,056
Number of Sequences: 53049
Number of extensions: 616926
Number of successful extensions: 1441
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)