Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40317
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical pr...    61   7e-10
Z81507-1|CAB04133.1|  485|Caenorhabditis elegans Hypothetical pr...    31   0.60 
AF036698-2|AAB88353.1|  485|Caenorhabditis elegans Puf (pumilio/...    31   0.80 
U80030-4|AAG24162.2|  370|Caenorhabditis elegans Serpentine rece...    31   1.1  
Z81463-8|CAB03849.2|  346|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z78410-2|CAB01636.2|  327|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL021479-1|CAA16321.2|  346|Caenorhabditis elegans Hypothetical ...    29   3.2  
U80030-6|AAG24164.1|  367|Caenorhabditis elegans Serpentine rece...    29   4.3  
Z83109-9|CAJ43453.1|  371|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical
           protein ZK945.3 protein.
          Length = 766

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 36/137 (26%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
 Frame = +3

Query: 255 IVQMGQSKYAHHSVKRILKYGTDFIRHEVLKKFYGHVVSLSTHAISAPVLDYAYGEFASK 434
           IV+M ++ Y+   VK++LK GT   R  ++  F GH  +L     +A VL+YAY +FA+ 
Sbjct: 318 IVRMSKNVYSKFFVKKMLKNGTKEQRDIIINAFRGHAPTLLRIKHAAEVLEYAYNDFANA 377

Query: 435 KEKCHMQQEFYGEIYKNTKDDKVKT-SEMHTKTVQK*NRLYSRPVSKLTEDIRQKPT-*W 608
            ++ ++  EFYG+ +   ++D +++ +E+  +  +K   +  + + ++   + +K T   
Sbjct: 378 HQRYNIITEFYGKEFILFREDNIRSLTEILAEKPEK-KVVILKHLDEVIGAVNEKETLRL 436

Query: 609 RIVHSVLYDYICECSQK 659
            I+H ++ D+   C ++
Sbjct: 437 SILHKLMLDFFDNCDEE 453



 Score = 37.5 bits (83), Expect = 0.009
 Identities = 21/68 (30%), Positives = 33/68 (48%)
 Frame = +1

Query: 43  SHKAKLLAAQIQRKVVKSDFRTNSCKELHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDI 222
           + K K L  +I+        +  +  EL+ ++KG    +   HD SRVI+ L+    E I
Sbjct: 247 AQKCKELWEKIRMGKTPKAEKDTAVHELYGLVKGHAAKLIYAHDTSRVIECLVATEREGI 306

Query: 223 INEITKEL 246
           IN +  EL
Sbjct: 307 INNLFNEL 314


>Z81507-1|CAB04133.1|  485|Caenorhabditis elegans Hypothetical
           protein F18A11.1 protein.
          Length = 485

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = +3

Query: 249 RHIVQMGQSKYAHHSVKRILKYGTDFIRHEVLKK-FYGHV--VSLSTHAISAPVLDYAYG 419
           R+++ M Q KYA H ++    +    + HE++++ F G+V  V L+  A+   +L + YG
Sbjct: 329 RNLLSMSQDKYASHVIEGAFLFAPPALLHEMMEEIFSGYVKDVELNRDALDI-LLFHQYG 387

Query: 420 EF 425
            +
Sbjct: 388 NY 389


>AF036698-2|AAB88353.1|  485|Caenorhabditis elegans Puf
           (pumilio/fbf) domain-containingprotein 7 protein.
          Length = 485

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 15/61 (24%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +3

Query: 249 RHIVQMGQSKYAHHSVKRILKYGTDFIRHEVLKK-FYGHVVSLSTHAISAPV-LDYAYGE 422
           R+++ M Q KYA H ++    +    + HE++++ F G+V  + ++  +  + L + YG 
Sbjct: 329 RNLLSMSQDKYASHVIEGAFLFAPPALLHEMMEEIFSGYVKDVESNRDALDILLFHQYGN 388

Query: 423 F 425
           +
Sbjct: 389 Y 389


>U80030-4|AAG24162.2|  370|Caenorhabditis elegans Serpentine
           receptor, class w protein120 protein.
          Length = 370

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +1

Query: 349 SFMDMLYPCQLMLLVHLSWIMHMGSLLRKRKNATC---NKNSMER 474
           SF+  + PC L+ +V L  IM++    +KR N T    N NSM +
Sbjct: 225 SFVSDIIPCLLLPIVTLLLIMNLWKTAKKRANITSVSKNNNSMSK 269


>Z81463-8|CAB03849.2|  346|Caenorhabditis elegans Hypothetical
           protein C06B8.6 protein.
          Length = 346

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -2

Query: 544 FHFWTVFVCISEVFTLSSFVFL*ISP*NSCCMWHFSFFEANSPY 413
           FHFWT FV I  VF++    FL       C +    +FE N+ Y
Sbjct: 65  FHFWTCFVDI--VFSILVCPFLVAPLYAGCTLGLLQYFEINTEY 106


>Z78410-2|CAB01636.2|  327|Caenorhabditis elegans Hypothetical
           protein C51E3.2 protein.
          Length = 327

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 504 SPCHLLYSYKSLHRILVACGIFPF 433
           SPCHLL     +  +L  CG FPF
Sbjct: 42  SPCHLLICATCIADLLHVCGQFPF 65


>AL021479-1|CAA16321.2|  346|Caenorhabditis elegans Hypothetical
           protein Y22F5A.2 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -3

Query: 192 LNNSTEIMSESDRLVLSL*HIVQFFTGVCSEVRFHNFSLYLCC*QLGLM*NLKYFSCYF 16
           LN S E + +S R+ +    ++ FF         ++F +YL C   G++ + +Y+  YF
Sbjct: 2   LNTSGETIEQSVRIFMGTSGVISFF--------INSFGVYLICYHHGMIDDYRYYLLYF 52


>U80030-6|AAG24164.1|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein119 protein.
          Length = 367

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 349 SFMDMLYPCQLMLLVHLSWIMHMGSLLRKRKNATCNKN 462
           SF+  + PC L+ +V L  IM++    +KR N T   N
Sbjct: 225 SFVSDIIPCLLLPIVTLLLIMNLWKTAKKRANITSATN 262


>Z83109-9|CAJ43453.1|  371|Caenorhabditis elegans Hypothetical
           protein F44G3.14 protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/66 (27%), Positives = 31/66 (46%)
 Frame = +3

Query: 393 APVLDYAYGEFASKKEKCHMQQEFYGEIYKNTKDDKVKTSEMHTKTVQK*NRLYSRPVSK 572
           A V D  +  +    E     +EFY  +   +K+D VK  ++ TK+V   N  +  P + 
Sbjct: 263 AQVFDSFWKSYKVSVEDMLHFREFYVIVPCFSKEDAVKLRDLLTKSVDFENGCFKFPETN 322

Query: 573 LTEDIR 590
           + E +R
Sbjct: 323 IIEIVR 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,641,337
Number of Sequences: 27780
Number of extensions: 334768
Number of successful extensions: 984
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)