Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40316
(669 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 142 7e-33
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 128 1e-28
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 126 4e-28
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 115 9e-25
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 111 2e-23
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 98 1e-19
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 97 3e-19
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 91 2e-17
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 84 3e-15
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 82 1e-14
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 79 7e-14
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 76 9e-13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 70 6e-11
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 60 5e-08
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 57 3e-07
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 55 1e-06
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 54 3e-06
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 47 4e-04
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 46 6e-04
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 46 6e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 46 8e-04
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 45 0.001
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 45 0.002
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 45 0.002
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.018
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 40 0.054
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 40 0.054
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 40 0.072
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 38 0.29
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 37 0.38
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.51
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 36 0.67
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 36 0.67
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 36 0.88
UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetic... 34 2.7
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 3.6
UniRef50_Q7SYI4 Cluster: Zgc:66488; n=5; Danio rerio|Rep: Zgc:66... 33 6.2
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 6.2
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 33 8.2
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 142 bits (344), Expect = 7e-33
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = -1
Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 328
GTKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKL
Sbjct: 54 GTKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKL 113
Query: 327 RWMVKKWQTLIEANIDVKTTDGYV 256
R MVKKWQTLIE ++DVKTTDG++
Sbjct: 114 RSMVKKWQTLIECSVDVKTTDGFM 137
Score = 113 bits (271), Expect = 5e-24
Identities = 50/72 (69%), Positives = 62/72 (86%)
Frame = -3
Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
RVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM II R++T+++L+ VV KL+PDSIAK
Sbjct: 139 RVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAK 198
Query: 73 DIEKACHGIYPL 38
DIEKAC +YPL
Sbjct: 199 DIEKACQVVYPL 210
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -2
Query: 605 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVN 516
+VDPFTRKDWYDVKAP+MF RQVG TLVN
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVN 50
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 128 bits (309), Expect = 1e-28
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = -1
Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 328
GTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+
Sbjct: 54 GTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
Query: 327 RWMVKKWQTLIEANIDVKTTDGYV 256
MVKKWQT+IEA++DVKTTDGY+
Sbjct: 111 CSMVKKWQTMIEAHVDVKTTDGYL 134
Score = 108 bits (260), Expect = 1e-22
Identities = 51/76 (67%), Positives = 59/76 (77%)
Frame = -3
Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
R+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI K
Sbjct: 136 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 195
Query: 73 DIEKACHGIYPLARCF 26
DIEKAC IYPL F
Sbjct: 196 DIEKACQSIYPLHDVF 211
Score = 52.4 bits (120), Expect = 1e-05
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = -2
Query: 605 IVDPFTRKDWYDVKAPSMFSKRQVGTTLV 519
+VDPF++KDWYDVKAP+MF+ R +G TLV
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLV 49
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 126 bits (305), Expect = 4e-28
Identities = 63/83 (75%), Positives = 71/83 (85%)
Frame = -1
Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 328
GTKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKL
Sbjct: 448 GTKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKL 505
Query: 327 RWMVKKWQTLIEANIDVKTTDGY 259
R +V+KWQTLIEA++DVKTTD Y
Sbjct: 506 RSLVRKWQTLIEAHVDVKTTDNY 528
Score = 86.6 bits (205), Expect = 5e-16
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = -3
Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
R+FCI FT K +KTCYAQ +Q+R IR+KM EI+T T+ +L+E+V K IP+SI +
Sbjct: 531 RLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGR 590
Query: 73 DIEKACHGIYPLARCF 26
+IEKA IYPL +
Sbjct: 591 EIEKATSSIYPLQNVY 606
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -2
Query: 599 DPFTRKDWYDVKAPSMFSKRQVGTTLVN 516
DPF +KDWYD+KAPS+F R VG TLV+
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVS 444
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 115 bits (277), Expect = 9e-25
Identities = 55/83 (66%), Positives = 68/83 (81%)
Frame = -1
Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 328
GTK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKL
Sbjct: 52 GTKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKL 109
Query: 327 RWMVKKWQTLIEANIDVKTTDGY 259
R ++ KW TLIE +DVKTTDGY
Sbjct: 110 RSLIHKWSTLIECFVDVKTTDGY 132
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = -3
Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSI 80
RVF I FT K ++KT YA+ ++V+AIRKKM +I+T V++++L+ VV+ LI S+
Sbjct: 135 RVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSL 192
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 4/33 (12%)
Frame = -2
Query: 602 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVN 516
VDPFTRK+WY V+AP+ F K +VG T VN
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVN 48
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 111 bits (266), Expect = 2e-23
Identities = 55/97 (56%), Positives = 70/97 (72%)
Frame = -1
Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 328
G K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKL
Sbjct: 53 GMKNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKL 110
Query: 327 RWMVKKWQTLIEANIDVKTTDGYVHVSSALVSPIRTP 217
R +V+KWQ+LIEAN+ VKTTD Y+ A+ R P
Sbjct: 111 RSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRP 147
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = -3
Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
R+F I T + +KT YA +Q+RAIR+KM EII R+ + L+++ NKLIP+ I +
Sbjct: 136 RLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGR 195
Query: 73 DIEKACHGIYPL 38
+IEKA GIYPL
Sbjct: 196 EIEKATQGIYPL 207
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = -2
Query: 599 DPFTRKDWYDVKAPSMFSKRQVGTTLVN 516
DPF RKDWY +KAP+ F+ R VG TLVN
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVN 49
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 98.3 bits (234), Expect = 1e-19
Identities = 50/128 (39%), Positives = 83/128 (64%)
Frame = -1
Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 328
G +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D+T D+L
Sbjct: 55 GNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRL 113
Query: 327 RWMVKKWQTLIEANIDVKTTDGYVHVSSALVSPIRTP*ANARRATPSTLRSEQSERKCVK 148
M++KWQTLIEA +D KT DGY+ L +T + ++++ ST ++ S+ + ++
Sbjct: 114 CSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKT--SAGKQSSTSTCYAKSSQVRAIR 171
Query: 147 SLHATSLT 124
T +T
Sbjct: 172 RKINTFIT 179
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = -3
Query: 280 CEDNRWIRSRVFCIGFTNKDSL---SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELRE 110
C+ N RVF + FT K S S TCYA+ +QVRAIR+K+ IT + + E
Sbjct: 130 CKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAE 189
Query: 109 VVNKLIPDSIAKDIEKACHGIYPL 38
LI + K IEK I+PL
Sbjct: 190 FSKNLIGEDYTKKIEKETKNIFPL 213
Score = 40.3 bits (90), Expect = 0.041
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -2
Query: 602 VDPFTRKDWYDVKAPSMFSKRQVGTTLV 519
+DP +RK+WYD +AP FS + G TLV
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLV 50
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 97.5 bits (232), Expect = 3e-19
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = -1
Query: 522 CQPYPGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDL 343
C GT+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++
Sbjct: 49 CNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEV 108
Query: 342 TTDKLRWMVKKWQTLIEANIDVKTTDGY 259
TTDK+ +++KW T +E ++VKT DGY
Sbjct: 109 TTDKMANLLRKWCTTMETTVEVKTADGY 136
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/72 (26%), Positives = 42/72 (58%)
Frame = -3
Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
R+F + FT + Q + CYA+ V+ +R ++ ++I R ++ +++E V+ L + ++
Sbjct: 139 RLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSD 198
Query: 73 DIEKACHGIYPL 38
+ + C+ I PL
Sbjct: 199 ALVRRCNPILPL 210
Score = 36.3 bits (80), Expect = 0.67
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -2
Query: 599 DPFTRKDWYDVKAPSMFSKRQVGTTLVN 516
+ RK+WYDV AP+ F KRQ T+ N
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICN 50
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 91.1 bits (216), Expect = 2e-17
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = -1
Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 328
GT+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKL
Sbjct: 55 GTRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKL 112
Query: 327 RWMVKKWQTLIEANIDVKTTDGYV 256
R +VKKW TLIE ++DVKTTDG++
Sbjct: 113 RSIVKKWCTLIETSVDVKTTDGHL 136
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = -3
Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
R+FCIGFT++ S +KT YA+ Q++ IRK M +IT++ + EL + V+ L + K
Sbjct: 138 RIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLKKTNFQK 197
Query: 73 DI 68
+
Sbjct: 198 KL 199
Score = 41.5 bits (93), Expect = 0.018
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -2
Query: 605 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVN 516
I +PF++K+WY+VK P F +R VG +VN
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVN 51
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 83.8 bits (198), Expect = 3e-15
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = -1
Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 328
GT +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 51 GTVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKI 109
Query: 327 RWMVKKWQTLIEANIDVKTTDGYV 256
M+KK QTLIE ++ ++ DGY+
Sbjct: 110 FGMIKKRQTLIETQVEARSQDGYI 133
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = -3
Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
R+F I FT QRKT YAQ +Q++ IRKK+ EI+ ++V+ + +++ +S+AK
Sbjct: 135 RIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAK 194
Query: 73 DIEKACHGIYPL 38
+I KA I+PL
Sbjct: 195 EIGKATRTIFPL 206
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -1
Query: 417 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 259
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGY 59
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = -3
Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
R F I FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +
Sbjct: 62 RFFVIAFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQ 120
Query: 73 DIEKACHGIYPLA 35
D I+PL+
Sbjct: 121 DAMNEASSIFPLS 133
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 79.4 bits (187), Expect = 7e-14
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = -1
Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 328
GTKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+DLT+DK+
Sbjct: 54 GTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKI 107
Query: 327 RWMVKKWQTLIEANIDVKTTD 265
++K I +V+T D
Sbjct: 108 TSQIRKKMMEIMTR-EVQTND 127
Score = 72.5 bits (170), Expect = 8e-12
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = -3
Query: 169 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLARCF 26
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVF 158
Score = 50.4 bits (115), Expect = 4e-05
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -2
Query: 605 IVDPFTRKDWYDVKAPSMFSKRQVGTTLV 519
+VDPF++KDWYDV AP+MF+ R +G TLV
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLV 49
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 75.8 bits (178), Expect = 9e-13
Identities = 44/83 (53%), Positives = 54/83 (65%)
Frame = -1
Query: 504 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 325
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 324 WMVKKWQTLIEANIDVKTTDGYV 256
V KWQ ++EA+ DVKT D Y+
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYL 118
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = -3
Query: 250 VFCIGFT-NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
+FC+G+T N + R+ AQ+ QV I +I+ D ++L+EV+NKL+PD++ K
Sbjct: 121 LFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGK 178
Query: 73 DIEKACHGIYPLARCF 26
D+EKAC IYPL F
Sbjct: 179 DVEKACQFIYPLHDVF 194
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = -1
Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 334
GTKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M L+ D
Sbjct: 54 GTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMGLSCD 108
Score = 44.4 bits (100), Expect = 0.003
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = -2
Query: 602 VDPFTRKDWYDVKAPSMFSKRQVGTTLV 519
VD ++KDWYD+KAP+MF+ R +G TLV
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLV 49
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = -1
Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 328
G ++A++ + RV+EV+L DL + KF L + V L NFHGMD+T K
Sbjct: 51 GLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKY 110
Query: 327 RWMVKKWQTLIEANIDVKTTDGYV 256
+ +K I+ +D+ TTDGY+
Sbjct: 111 GSLFRKGCDCIDVFMDIPTTDGYL 134
Score = 35.1 bits (77), Expect = 1.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 599 DPFTRKDWYDVKAPSMFSKRQVGTTLV 519
DP+ +K+WY V AP+ F R +G T V
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPV 46
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = -1
Query: 477 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 298
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 297 IEANIDVKTTDGYV 256
IEA D+ DG V
Sbjct: 73 IEAQKDIVAKDGSV 86
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/75 (32%), Positives = 46/75 (61%)
Frame = -3
Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
RVF +G T + +KTCY +H+ + IRK M ++I +++ ++++++ KL +++ K
Sbjct: 88 RVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGK 147
Query: 73 DIEKACHGIYPLARC 29
IE+ I+PL C
Sbjct: 148 RIEELGSEIFPLQNC 162
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = -1
Query: 492 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 313
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 312 KWQTLIEANIDVKTTDGY 259
KW TLIE ++ KT DGY
Sbjct: 112 KWHTLIEVEVNFKTKDGY 129
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = -1
Query: 501 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 322
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 321 MVKKWQTLIEANIDVKTTDGYV 256
+++K++T+I+A++D KT DG++
Sbjct: 109 IMRKYRTMIDASVDAKTADGFI 130
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = -3
Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
R+F IGFT K + S + YA + R +R M + +T + + ++ + + I
Sbjct: 132 RLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQLCKDFVDEKIEN 191
Query: 73 DIEKACHGI 47
+I + C I
Sbjct: 192 EIVEKCKQI 200
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 47.2 bits (107), Expect = 4e-04
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Frame = -1
Query: 483 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 304
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 303 TLIEANIDVKTTDGY-VHVSSALVSPIRTP*ANARRATPSTLRSEQSERKCVK 148
+ I A ++V+T DG+ V V + +++ +R A T +R EQ ++ K
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVR---ARDHHKTEIRVRMEQIIKEMAK 156
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = -1
Query: 477 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 298
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 297 IEANIDVKTTDGY 259
I+AN+ V T DG+
Sbjct: 102 IDANVVVTTKDGF 114
Score = 33.9 bits (74), Expect = 3.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 602 VDPFTRKDWYDVKAPSMFSKRQVGTTLVN 516
VD F K+WY V AP+ F++ +G TL +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD 37
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 46.4 bits (105), Expect = 6e-04
Identities = 28/100 (28%), Positives = 48/100 (48%)
Frame = -1
Query: 477 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 298
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 297 IEANIDVKTTDGYVHVSSALVSPIRTP*ANARRATPSTLR 178
IE +DV T DGY ++V +R + +RA + +R
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFTVRRCKTSQKRAIRAIMR 145
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 46.0 bits (104), Expect = 8e-04
Identities = 29/85 (34%), Positives = 44/85 (51%)
Frame = -1
Query: 477 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 298
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 297 IEANIDVKTTDGYVHVSSALVSPIR 223
I+ +V+T+DGY L P R
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDR 131
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 45.2 bits (102), Expect = 0.001
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = -1
Query: 507 GTKIASEG--LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 334
GT +A + L GR E ++ +L D ++ K L V G + G +LTTD
Sbjct: 33 GTTMAGDPSLLVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTD 90
Query: 333 KLRWMVKKWQTLIEANIDVKTTDGYV 256
+R +VK+ + I+AN+DV+T DG+V
Sbjct: 91 YVRSIVKRQTSRIDANVDVRTKDGFV 116
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = -3
Query: 103 NKLIPDSIAKDIEKACHGIYPLARCF 26
NKLIPDSI KDIEKAC IYPL F
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVF 26
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = -1
Query: 474 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 295
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 294 EANIDVKTTDGYV 256
A +VKT DG V
Sbjct: 113 TAITEVKTKDGMV 125
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.018
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = -2
Query: 605 IVDPFTRKDWYDVKAPSMFSKRQVGTT 525
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 39.9 bits (89), Expect = 0.054
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = -1
Query: 495 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 316
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 315 KKWQTLIEANIDVKTTDGYV 256
++++ I+ IDV T DGY+
Sbjct: 108 RRYRGKIDDVIDVVTEDGYL 127
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 39.9 bits (89), Expect = 0.054
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = -1
Query: 489 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 310
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 309 WQTLIEANIDVKTTDGYVHVSSALVSPIRTP*ANARRATPSTLRS--EQSERKC 154
+ I+ IDV T DGY + L R + +RA + E++ ++C
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFTTRRAKTSQQRAIRKEMFKVIEENAKEC 145
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 39.5 bits (88), Expect = 0.072
Identities = 22/75 (29%), Positives = 41/75 (54%)
Frame = -1
Query: 480 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 301
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 300 LIEANIDVKTTDGYV 256
+ +DVKT+DGYV
Sbjct: 102 KVNYIVDVKTSDGYV 116
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 37.5 bits (83), Expect = 0.29
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = -1
Query: 477 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 298
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 297 IEANIDVKTTDGY 259
+EA+I V TTD Y
Sbjct: 100 VEASITVLTTDDY 112
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 37.1 bits (82), Expect = 0.38
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = -1
Query: 477 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 298
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 297 IEANIDVKTTDGY 259
+EA I V TTD Y
Sbjct: 100 VEAYITVLTTDDY 112
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.51
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = -1
Query: 477 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 298
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 297 IEANIDVKTTDGY 259
I +D+ T DG+
Sbjct: 108 INKVVDITTKDGF 120
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 36.3 bits (80), Expect = 0.67
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 513 TVDKRGADLPLAEHRRSLDIVPIFASEWVDNLLLNTFFTALRQAFIFPDRH 665
+ +K A++ AE RR L+++P+ S+ V LLL++ F L +FPD H
Sbjct: 104 SANKGFANISDAEDRRRLNVIPVLLSKRVGCLLLSSLF-PLGNPLVFPDDH 153
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 36.3 bits (80), Expect = 0.67
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = -1
Query: 483 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 304
L GR EV++ +L D + + K R + V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 303 TLIEANIDVKTTD 265
+ I+A+ VKT D
Sbjct: 102 SRIDASSVVKTKD 114
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 35.9 bits (79), Expect = 0.88
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = -1
Query: 489 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 310
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 309 WQTLIEANIDV 277
+ +++ I V
Sbjct: 101 RASRVDSTITV 111
>UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to Hypothetical 115 kDa protein in
type I retrotransposable element R1DM (ORF 2), partial -
Tribolium castaneum
Length = 2033
Score = 34.3 bits (75), Expect = 2.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 145 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLARCFASER 14
+ +D S+LRE + P S+ K +++AC+ P RCF + R
Sbjct: 875 LDKDKLLSKLREATCESTPASLNKILQRACNAAMPKKRCFRNRR 918
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 3.6
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +2
Query: 281 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 445
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q7SYI4 Cluster: Zgc:66488; n=5; Danio rerio|Rep: Zgc:66488
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 557
Score = 33.1 bits (72), Expect = 6.2
Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -1
Query: 273 TTDGYVHVSSALVSPIRTP*ANARRATPSTLRSEQSERKCVKS----LHATSLTLNSGRW 106
TT G H+S + SP +TP + T STLR+E S C K A + TL SGR
Sbjct: 100 TTPGETHLSLSFDSPDKTP---SGPLTNSTLRAEHSAFSCHKRRLLFSQAVTSTLESGRS 156
Query: 105 *TS*FLTPLPRTSR 64
S LTP SR
Sbjct: 157 GVS--LTPESYQSR 168
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 6.2
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 131 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 238
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -3
Query: 208 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 62
R CY + Q++ + + D TNSE+ +VNKL +SI K +K
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,622,354
Number of Sequences: 1657284
Number of extensions: 14364943
Number of successful extensions: 42113
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 40590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42098
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -