Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40316
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.0  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   6.9  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   9.1  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 454 QGNFENSSLQSFRSNFRSRVRLTSVVPTCLLLNIDGALTSY 576
           + N ++ SLQ      +  V    VV   LL +I GA+T+Y
Sbjct: 337 ENNVQSYSLQLLHQKVQFSVLGFFVVDYTLLYSIVGAVTTY 377


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 323 GWLKNGRLSS 294
           GWLK G+LSS
Sbjct: 124 GWLKKGKLSS 133


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 451 SQGNFENSSLQSFRSNFRSRVRLTSVVPTCLLLNIDGALT 570
           + G+   SS    RS +RSR+R    + + L+L I G  T
Sbjct: 28  TSGHLLGSSSLPLRSFYRSRIRYQGRI-SSLILPIYGLST 66


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +1

Query: 250 HVNVSIGCLHINVGFDESLPFFNH---PPE 330
           + N+S  CL++N+   + L   +H   PP+
Sbjct: 6   NTNISEDCLYLNIWVPQRLRIRHHGDKPPQ 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,066
Number of Sequences: 336
Number of extensions: 3502
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)