Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40316
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   140   4e-35
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           28   0.31 
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        27   0.71 
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    25   1.6  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  140 bits (339), Expect = 4e-35
 Identities = 66/84 (78%), Positives = 75/84 (89%)
 Frame = -1

Query: 507 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 328
           GTKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKL
Sbjct: 54  GTKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKL 113

Query: 327 RWMVKKWQTLIEANIDVKTTDGYV 256
           R MV KWQTLIE ++DVKTTDG++
Sbjct: 114 RSMVNKWQTLIECSVDVKTTDGFM 137



 Score =  113 bits (271), Expect = 6e-27
 Identities = 50/72 (69%), Positives = 62/72 (86%)
 Frame = -3

Query: 253 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 74
           RVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM  II R++T+++L+ VV KL+PDSIAK
Sbjct: 139 RVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAK 198

Query: 73  DIEKACHGIYPL 38
           DIEKAC  +YPL
Sbjct: 199 DIEKACQVVYPL 210



 Score = 58.4 bits (135), Expect = 2e-10
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = -2

Query: 605 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVN 516
           +VDPFTRKDWYDVKAP+MF  RQ G TLVN
Sbjct: 21  VVDPFTRKDWYDVKAPNMFKNRQSGKTLVN 50


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = -1

Query: 462 VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 301
           V+LA+L A +D  E    ++  I + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 26.6 bits (56), Expect = 0.71
 Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = -1

Query: 462 VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 301
           V+LA+L A +D  E    ++  + + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +3

Query: 474 FPSILPKQFSFPGTVDKRGA-DLPLAEHRRSL-DIVPIFASE 593
           FP+I P   SF   V +RG   +  A HRR+   ++ +F  +
Sbjct: 62  FPNISPPDLSFADVVSRRGVFSVFNAAHRRAAGQLIQLFLDQ 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,530
Number of Sequences: 2352
Number of extensions: 15275
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)