Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40315
(530 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 130 3e-29
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 103 3e-21
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 89 4e-17
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 89 6e-17
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 89 8e-17
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 86 4e-16
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 85 1e-15
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 83 5e-15
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 81 2e-14
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 80 4e-14
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 79 6e-14
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 77 3e-13
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 75 1e-12
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 73 6e-12
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 72 7e-12
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 72 1e-11
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 70 3e-11
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 62 8e-09
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 52 8e-06
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 48 1e-04
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 48 1e-04
UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit co... 48 2e-04
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 48 2e-04
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 47 3e-04
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 46 5e-04
UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondria... 46 7e-04
UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protei... 45 0.001
UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n... 44 0.002
UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16; stramenopi... 44 0.002
UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=... 44 0.002
UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus... 44 0.002
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 43 0.004
UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=... 43 0.004
UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19... 43 0.005
UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.012
UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1; Helicospori... 41 0.021
UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of str... 41 0.021
UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellul... 40 0.036
UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|R... 39 0.063
UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellu... 39 0.063
UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19; ... 39 0.063
UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellul... 39 0.083
UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellul... 38 0.11
UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19, pu... 38 0.19
UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47; Bacter... 38 0.19
UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10; Rickettsia... 37 0.25
UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1; Oltmannsiel... 37 0.33
UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1; Pseudendocl... 36 0.44
UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;... 36 0.77
UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1; ... 35 1.0
UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19; ... 35 1.0
UniRef50_A7QLC7 Cluster: Chromosome chr11 scaffold_118, whole ge... 34 1.8
UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Re... 33 3.1
UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria r... 33 3.1
UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum parv... 33 3.1
UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|R... 33 4.1
UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2; Dictyosteli... 33 4.1
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 130 bits (313), Expect = 3e-29
Identities = 56/61 (91%), Positives = 61/61 (100%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPL 433
++PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPL
Sbjct: 85 ILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPL 144
Query: 434 K 436
K
Sbjct: 145 K 145
Score = 111 bits (268), Expect = 7e-24
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +3
Query: 21 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 200
KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+K+LR+AKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKE 66
Query: 201 APPNEKPEIVKTHLRNMISFP 263
APP EKPE+VKTHLR+MI P
Sbjct: 67 APPMEKPEVVKTHLRDMIILP 87
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 103 bits (246), Expect = 3e-21
Identities = 47/61 (77%), Positives = 55/61 (90%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPL 433
+VPEM+GS+VGIYNGK FNQVEI+PEM+GHYLGEFS+TY PV+HGR GAT +SRFIPL
Sbjct: 85 IVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGR--AGAT-TSRFIPL 141
Query: 434 K 436
K
Sbjct: 142 K 142
Score = 80.2 bits (189), Expect = 3e-14
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = +3
Query: 24 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 203
KKR+F+ +YRGVDL++LL+M E ++L G+ KP +KKLR AK A
Sbjct: 8 KKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAA 67
Query: 204 PPNEKPEIVKTHLRNMISFP 263
P NEKP V+TH+RNMI P
Sbjct: 68 PENEKPAPVRTHMRNMIIVP 87
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 89.4 bits (212), Expect = 4e-17
Identities = 39/76 (51%), Positives = 54/76 (71%), Gaps = 4/76 (5%)
Frame = +2
Query: 221 RDREDSLEKHD----LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 388
R D L+ H + P M+ + +YNG +++ +E++ M+G +LGEFS+TYKPVKHG
Sbjct: 76 RKTNDKLKTHVRNCIITPSMINKKIYVYNGNSYSYIELQTLMLGKFLGEFSLTYKPVKHG 135
Query: 389 RPGIGATHSSRFIPLK 436
PGIGATHSSRFIPL+
Sbjct: 136 NPGIGATHSSRFIPLR 151
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 89.0 bits (211), Expect = 6e-17
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Frame = +2
Query: 152 T*TNGIGQE----AASRQERGSSE*EARDREDSLEKHDLVPEMVGSIVGIYNGKTFNQVE 319
T T G+ +E A +E G+ E L ++PE VG +Y G+ F +VE
Sbjct: 42 TITRGLSEEHHKVLAEARESGTEETANNPIRTHLRDMPVLPEFVGLTFAVYTGQEFERVE 101
Query: 320 IKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 436
++PEMIGHYLGEF +T V+HG+ GIGAT SS+F+PLK
Sbjct: 102 VQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
Score = 41.5 bits (93), Expect = 0.012
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +3
Query: 42 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 221
+FTYRG DLD+L +M E + EL+ GL + ++ + R + E N
Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNP- 70
Query: 222 EIVKTHLRNMISFPRW 269
++THLR+M P +
Sbjct: 71 --IRTHLRDMPVLPEF 84
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 88.6 bits (210), Expect = 8e-17
Identities = 38/61 (62%), Positives = 48/61 (78%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPL 433
++P VG IV +YNG ++ + EIKPEMIGHYLGEF +T K VKH PG+GAT SS+F+PL
Sbjct: 91 ILPNYVGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPL 150
Query: 434 K 436
K
Sbjct: 151 K 151
Score = 32.3 bits (70), Expect = 7.2
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = +3
Query: 39 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEK 218
++FTY+G L+ L M E+L++++ L R+P KKL K E+
Sbjct: 28 KEFTYKGYSLEDLQKMSMEELIKIL----PARARRTLLREPNYEQKKLME-KLES----D 78
Query: 219 PEIVKTHLRNMISFPRW 269
E VKTH+R++I P +
Sbjct: 79 EEDVKTHVRDVIILPNY 95
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 86.2 bits (204), Expect = 4e-16
Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +3
Query: 24 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 203
KKR F+KF++RG ++D LL M N L +L + GLK++P+ L+KKLRRAKKEA
Sbjct: 17 KKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEA 76
Query: 204 PPNE--KPEIVKTHLRNMISFP 263
KPE+VKTHLRNMI P
Sbjct: 77 SDENKMKPEVVKTHLRNMIIVP 98
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 4/65 (6%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGA----THSSR 421
+VPEM+GS+VG++NGK FN++ IKPEMIGHYL EFS+T K V H RP I S+R
Sbjct: 96 IVPEMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKKVNHHRPRICGCCCFRRSTR 155
Query: 422 FIPLK 436
FIPL+
Sbjct: 156 FIPLR 160
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 84.6 bits (200), Expect = 1e-15
Identities = 45/87 (51%), Positives = 57/87 (65%), Gaps = 6/87 (6%)
Frame = +3
Query: 21 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXX------GLKRKPMALVKKL 182
+KK+ FR FT RGVDLDQLLDM +EQ M+L GL RK +L+K+L
Sbjct: 20 QKKQTFRNFTQRGVDLDQLLDMSSEQRMQLNSARRRRLNPGLWRLNPGLWRKQRSLLKRL 79
Query: 183 RRAKKEAPPNEKPEIVKTHLRNMISFP 263
R+AKK APP EKPE+VKTH R+++ P
Sbjct: 80 RKAKKGAPPTEKPEVVKTHPRDVLLLP 106
Score = 39.1 bits (87), Expect = 0.063
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEI 322
L+P MVGS VG+Y+GKTF QVE+
Sbjct: 104 LLPAMVGSTVGVYDGKTFKQVEM 126
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 82.6 bits (195), Expect = 5e-15
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPL 433
++PEMVG +YNGK F + ++ PEMIGHYLGEFS+T K V+HG PG+ AT SS F+ +
Sbjct: 79 ILPEMVGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEPGLKATRSSLFLAM 138
Query: 434 K 436
K
Sbjct: 139 K 139
Score = 50.4 bits (115), Expect = 3e-05
Identities = 25/76 (32%), Positives = 44/76 (57%)
Frame = +3
Query: 36 FRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNE 215
++KF YRG LD+LL+MP ++ ++L+ G K L++K+R+ +E +
Sbjct: 9 WKKFRYRGKSLDELLNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVRE---GK 65
Query: 216 KPEIVKTHLRNMISFP 263
+ +KTH+R+MI P
Sbjct: 66 YSKTIKTHVRDMIILP 81
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 80.6 bits (190), Expect = 2e-14
Identities = 34/61 (55%), Positives = 46/61 (75%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPL 433
+ PEM+G V +YNG+ F VEIKP M+G L E+S++YK V HG+ GIGAT SS+F+PL
Sbjct: 85 IFPEMIGMTVSVYNGRQFIPVEIKPPMVGRALREYSMSYKIVSHGKVGIGATRSSKFVPL 144
Query: 434 K 436
+
Sbjct: 145 R 145
Score = 52.0 bits (119), Expect = 8e-06
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 DETLKKKRIFRKFTYRGVDLDQLLDMP-NEQLMELMHXXXXXXXXXGLKRKPMALVKKLR 185
D+ ++R + +RGV++++L M + L +L GL K + V KLR
Sbjct: 3 DQVKTRRRGLAQPNFRGVEVEKLATMKITDILPKLNARCRRRIGKHGLSMKHLRFVNKLR 62
Query: 186 RAKKEAPPNEKPEIVKTHLRNMISFP 263
++ A P++KP+IV+THLR+MI FP
Sbjct: 63 -LRRAAQPSQKPKIVRTHLRDMIIFP 87
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 79.8 bits (188), Expect = 4e-14
Identities = 33/61 (54%), Positives = 45/61 (73%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPL 433
++PEM+G + ++NGK F VE++PEMIGH GEF+ T V HG G+GAT SS+F+PL
Sbjct: 76 ILPEMIGIAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGVGATRSSKFVPL 135
Query: 434 K 436
K
Sbjct: 136 K 136
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 79.0 bits (186), Expect = 6e-14
Identities = 37/61 (60%), Positives = 43/61 (70%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPL 433
++P MVG V +YNGK + V+IKPEMIGHYLGEFS T K KH PGIGAT SS +
Sbjct: 80 ILPFMVGVTVHVYNGKEYVPVQIKPEMIGHYLGEFSFTTKRPKHSAPGIGATRSSAHVSK 139
Query: 434 K 436
K
Sbjct: 140 K 140
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 76.6 bits (180), Expect = 3e-13
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPL 433
++PEMVG +G+++G+ F VEI PEMIGH LGE++ T + V H PG+GAT SS+ + L
Sbjct: 113 ILPEMVGRTIGVHDGRAFKMVEILPEMIGHALGEYASTRRSVTHTGPGVGATRSSKHVAL 172
Query: 434 K 436
K
Sbjct: 173 K 173
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 74.5 bits (175), Expect = 1e-12
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +2
Query: 260 PEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 436
P M+G++VG++ G + VEIKPEM+G L +F+ T KHGRPGIGA+ SS+F+PLK
Sbjct: 91 PAMIGALVGVHVGNGYLPVEIKPEMVGFVLSDFAPTRVTPKHGRPGIGASSSSKFVPLK 149
Score = 58.8 bits (136), Expect = 7e-08
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 DETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRR 188
+E KKKR FR++TYRGV +++L MP ++ +L GL + + L+K
Sbjct: 6 NEVSKKKRTFRRYTYRGVPVEELEKMPFSEVAKLFPSRLRRRVRRGLSSREVELIKGCIA 65
Query: 189 AKKE-APPNEKPEIVKTHLRNMISFP 263
AK + KPE+V+TH R+ I +P
Sbjct: 66 AKAACVSSSSKPEMVRTHARSAIIWP 91
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 72.5 bits (170), Expect = 6e-12
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPL 433
+ PEM+G GIYNGK F ++++ E +G +LGE + T V+HG PG+GAT S F+P+
Sbjct: 101 ITPEMIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSPGMGATRGSMFVPI 160
Query: 434 K 436
K
Sbjct: 161 K 161
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/74 (25%), Positives = 40/74 (54%)
Frame = +3
Query: 42 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 221
+F Y+G L++L +MP ++ ME++ G+ K LV K+++A++ +
Sbjct: 30 EFKYKGFSLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDA 89
Query: 222 EIVKTHLRNMISFP 263
+++TH R+ + P
Sbjct: 90 RVIRTHCRDFVITP 103
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 72.1 bits (169), Expect = 7e-12
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPL 433
++PE V +++GIY+G F +V+IKPEMIGH L +F+ + K VKH + G+GAT SS L
Sbjct: 84 ILPEFVDNVIGIYDGHVFFEVQIKPEMIGHVLADFAPSKKVVKHSKAGVGATRSSSATSL 143
Query: 434 K 436
K
Sbjct: 144 K 144
Score = 49.6 bits (113), Expect = 4e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +3
Query: 39 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKK--EAPPN 212
R +TYRG LD L M + +EL+ K + L++KL++A++ E
Sbjct: 10 RNYTYRGKTLDDLRAMELKDFVELLPTKRRRFISRSFDLKHVHLIEKLKKARQAVEGQAG 69
Query: 213 EKPEIVKTHLRNMISFPRW 269
+P +VKTHLR+M+ P +
Sbjct: 70 VRPPVVKTHLRHMVILPEF 88
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 71.7 bits (168), Expect = 1e-11
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 397
++PE+VG IVG+YNGK F VE+K +MIG YL EF++TYKP HG+ G
Sbjct: 90 VIPELVGGIVGVYNGKEFVNVEVKFDMIGKYLAEFAMTYKPTTHGKTG 137
Score = 49.6 bits (113), Expect = 4e-05
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +3
Query: 27 KRIFRKFTYRGVDLDQLLDMPN---------EQLMELMHXXXXXXXXXGLKRKPMALVKK 179
K+ +KFT+RG L++L + + ++L L G+ K V K
Sbjct: 5 KKSIKKFTFRGKGLEELTALASGSNSEKLISDELAALFDAKTRRRVKRGISEKYAKFVNK 64
Query: 180 LRRAKKEAPPNEKPEIVKTHLRNMISFP 263
+RR+K++ P EKP VKTH R+MI P
Sbjct: 65 VRRSKEKCPAGEKPVPVKTHYRSMIVIP 92
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 70.1 bits (164), Expect = 3e-11
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPL 433
++PEMVG + +YNG T+ V I P IGHYLGEF++T K V+HG PG+ AT SS I
Sbjct: 98 ILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLHIAA 157
Query: 434 K 436
K
Sbjct: 158 K 158
Score = 49.6 bits (113), Expect = 4e-05
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +3
Query: 45 FTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPE 224
F YRG L++LL+M ++ ++L+ GLK + L++K+R+AK+ A +K
Sbjct: 29 FRYRGKTLEELLNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKK-V 87
Query: 225 IVKTHLRNMISFP 263
+++TH R+MI P
Sbjct: 88 VIRTHCRDMIILP 100
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 62.1 bits (144), Expect = 8e-09
Identities = 36/58 (62%), Positives = 36/58 (62%)
Frame = -3
Query: 438 YLSGMNLELCVAPIPGLPCFTGLYVTENSPR*WPIISGLISTWLKVFPL*MPTIEPTI 265
YLSGMNLE P PC TG YV SPR PIISGLIST L PL PT EPTI
Sbjct: 11 YLSGMNLE---PERPARPCETGRYVIAYSPRYDPIISGLISTVLNTLPLYTPTTEPTI 65
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 52.0 bits (119), Expect = 8e-06
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +2
Query: 167 IGQEAASRQERGSSE*EARDREDSLEK-----HDLVPEMVGSIVGIYNGKTFNQVEIKPE 331
+G++ ++E GS+E + SL+K ++P+ VG+IV +YNGK F ++I E
Sbjct: 25 MGEDTRLKRE-GSTEQAFVTKSSSLQKIWSRRSCILPQFVGNIVSVYNGKNFVNLKITDE 83
Query: 332 MIGHYLGEFSVTYKPVK 382
M+GH GEF+ T K K
Sbjct: 84 MVGHKYGEFASTRKIAK 100
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
++PEMV + +YNGKTF + I +++GH LGEFS T
Sbjct: 40 IIPEMVSLTISVYNGKTFIPIYITEDLVGHKLGEFSPT 77
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 391
++P+M+G + ++NGK FN+V I EMIG+ LGEFS T H +
Sbjct: 33 IIPKMIGLNIFVHNGKKFNKVYIIEEMIGYKLGEFSFTKNFKSHSK 78
>UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit
component S19; n=2; Sclerotiniaceae|Rep: Mitochondrial
ribosome small subunit component S19 - Botryotinia
fuckeliana B05.10
Length = 93
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 373
++P VG I+NGK +N+V I +M+GH LGEFS T K
Sbjct: 44 ILPNFVGLTFEIHNGKVYNEVTITEDMVGHKLGEFSATRK 83
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 47.6 bits (108), Expect = 2e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
++PE VG + ++NGKTF V I +M+GH LGEF+ T
Sbjct: 165 IIPEFVGHTIAVHNGKTFVPVYITQDMVGHKLGEFAPT 202
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 46.8 bits (106), Expect = 3e-04
Identities = 23/37 (62%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEI-KPEMIGHYLGEFS 361
+V EM+G IVG+YNGKT NQV I KP+ I HYL S
Sbjct: 36 IVLEMIGYIVGVYNGKTLNQVGILKPKKICHYLTSLS 72
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 388
++PEMVG + ++NGK V + M+GH LGEF+VT HG
Sbjct: 38 ILPEMVGITIAVHNGKNHIPVLVNENMVGHKLGEFAVTRTFKGHG 82
>UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondrial
precursor; n=85; Streptophytina|Rep: 40S ribosomal
protein S19, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 212
Score = 45.6 bits (103), Expect = 7e-04
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2
Query: 218 ARDREDSLEKHDLVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 391
A +R+ + ++PE V S V IYNGKT + +I +GH GEF+ T K KH +
Sbjct: 153 ALNRKIWSRRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protein
S19; n=1; Schizosaccharomyces pombe|Rep: Probable
mitochondrial ribosomal protein S19 -
Schizosaccharomyces pombe (Fission yeast)
Length = 108
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 373
++P MVG+ ++NGK++ V+I +MIGH LGEF+ T K
Sbjct: 59 ILPRMVGAQFMVHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n=1;
unknown|Rep: UPI00015BD7EF UniRef100 entry - unknown
Length = 153
Score = 44.4 bits (100), Expect = 0.002
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
++ + V + ++NGKTF + I PEM+GH LGEF+ T
Sbjct: 99 VISDFVNHTIAVHNGKTFVPIYITPEMVGHKLGEFAPT 136
>UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16;
stramenopiles|Rep: Ribosomal protein S19 - Laminaria
digitata
Length = 89
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 373
+ P VG + IYNGK +IKPEM+GH LGEF T K
Sbjct: 35 IYPAAVGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTRK 74
>UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=7;
Eukaryota|Rep: Mitochondrial ribosomal protein S19 -
Marchantia polymorpha (Liverwort)
Length = 93
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 391
++P+ VG IYNGK F ++I EM+GH GEF+ T K G+
Sbjct: 32 ILPQFVGCYAQIYNGKGFVGLKITEEMVGHKFGEFASTRKTSSLGK 77
>UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S19 - Chlorokybus
atmophyticus (Soil alga)
Length = 130
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 385
++P+ VG ++NGK F V I EMIGH GEF+ T K H
Sbjct: 80 ILPDFVGQSFEVHNGKLFIPVRITEEMIGHKFGEFASTRKKPVH 123
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 43.2 bits (97), Expect = 0.004
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 361
++P VG ++NGKT+N+V I EM+G LGEFS
Sbjct: 19 ILPNFVGLKFAVHNGKTYNEVFITDEMVGRKLGEFS 54
>UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=3;
Chlorophyta|Rep: Mitochondrial ribosomal protein S19 -
Platymonas subcordiformis
Length = 83
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 260 PEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 385
P+ +G V IYNG + ++IK +MIGH GEF+ T K H
Sbjct: 37 PKFIGREVEIYNGHKWITIKIKEDMIGHKFGEFAFTRKATIH 78
>UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19;
n=16; Dikarya|Rep: Mitochondrial 37S ribosomal protein
S19 - Saccharomyces cerevisiae (Baker's yeast)
Length = 91
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 373
++P+ VG I+NGK + +EI +M+GH LGEF+ T K
Sbjct: 42 ILPQFVGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 152
Score = 41.5 bits (93), Expect = 0.012
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 361
++P VG ++NGK ++ V I EM+GH LGEFS
Sbjct: 87 ILPNFVGLKFQVHNGKVYHDVTITEEMVGHKLGEFS 122
>UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: Ribosomal
protein S19 - Helicosporidium sp. subsp. Simulium
jonesii (Green alga)
Length = 117
Score = 40.7 bits (91), Expect = 0.021
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
+VP M+G I+ ++NG+ V I EM+G LGEF+ T
Sbjct: 57 IVPLMIGEIIAVHNGREHIPVYITEEMVGFKLGEFATT 94
>UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 89
Score = 40.7 bits (91), Expect = 0.021
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 385
++P+ VG ++NGK + V + +M+G LGE++ T KP ++
Sbjct: 41 IIPQFVGVTFHVHNGKEYVPVNVTQDMVGTKLGEYAYTRKPFRY 84
>UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellular
organisms|Rep: 30S ribosomal protein S19 -
Wigglesworthia glossinidia brevipalpis
Length = 92
Score = 39.9 bits (89), Expect = 0.036
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
+ P+M+G + ++NGK + I EM+GH LGEF T
Sbjct: 40 IFPDMIGMTISVHNGKQHIPIFIGDEMVGHKLGEFVPT 77
>UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|Rep:
Ribosomal protein S19 - Malawimonas jakobiformis
Length = 85
Score = 39.1 bits (87), Expect = 0.063
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
+ P+ + V IYNG F ++I MIGH GEFS+T
Sbjct: 33 IYPQYLNKKVKIYNGNKFIPIKITDNMIGHKFGEFSLT 70
>UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellular
organisms|Rep: 30S ribosomal protein S19 - Shigella
flexneri
Length = 92
Score = 39.1 bits (87), Expect = 0.063
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
+ P M+G + ++NG+ V + EM+GH LGEF+ T
Sbjct: 40 IFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPT 77
>UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19;
n=326; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S19 - Arabidopsis thaliana (Mouse-ear cress)
Length = 92
Score = 39.1 bits (87), Expect = 0.063
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
++P M+G + I+NG+ V I M+GH LGEFS T
Sbjct: 40 IIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPT 77
>UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellular
organisms|Rep: 30S ribosomal protein S19 -
Propionibacterium acnes
Length = 93
Score = 38.7 bits (86), Expect = 0.083
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
+ P+M+G +G+++G+ V + M+GH LGEF+ T
Sbjct: 40 VTPDMIGHTIGVHDGRKHVPVFVTESMVGHKLGEFAPT 77
>UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellular
organisms|Rep: 30S ribosomal protein S19 - Onion yellows
phytoplasma
Length = 93
Score = 38.3 bits (85), Expect = 0.11
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
+ P VG + +YNG+ V I M+GH LGEFS T
Sbjct: 40 ITPIFVGHKIAVYNGREHIPVYITENMVGHKLGEFSPT 77
>UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19,
putative; n=2; Pezizomycotina|Rep: Mitochondrial
ribosomal protein S19, putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 89
Score = 37.5 bits (83), Expect = 0.19
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 373
++P VG ++NGKT+ V I +M+G LGE+ T K
Sbjct: 40 ILPNFVGLRFAVHNGKTYQDVLITEDMVGRKLGEYVPTRK 79
>UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47;
Bacteria|Rep: 30S ribosomal protein S19 - Streptococcus
pneumoniae
Length = 93
Score = 37.5 bits (83), Expect = 0.19
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
+ P +G + +Y+G+ V I+ +M+GH LGEF+ T
Sbjct: 40 IFPSFIGYTIAVYDGRKHVPVYIQEDMVGHKLGEFAPT 77
>UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10;
Rickettsiales|Rep: Ribosomal protein S19 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 94
Score = 37.1 bits (82), Expect = 0.25
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPE-MIGHYLGEFSVTYKPVKH 385
++P +G +YNGK + V + + MIGH GEFS T K H
Sbjct: 41 ILPNCLGLKFAVYNGKDYIPVSVNDQNMIGHKFGEFSPTRKFAGH 85
>UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S19 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 78
Score = 36.7 bits (81), Expect = 0.33
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 373
++P +V I+NGK F + + E IGH GEF+ T K
Sbjct: 32 ILPSLVNKQYKIFNGKRFIRFRVTEETIGHKFGEFASTRK 71
>UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S19 -
Pseudendoclonium akinetum (Green alga)
Length = 116
Score = 36.3 bits (80), Expect = 0.44
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 373
+VP M+G+ V I+ G F ++ I +G+ LGEF+ T K
Sbjct: 67 IVPGMIGNTVKIHTGHKFVKLSITEHTVGYKLGEFAPTKK 106
>UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S19 -
Astasia longa (Euglenophycean alga)
Length = 118
Score = 35.5 bits (78), Expect = 0.77
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +2
Query: 260 PEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
P MVG + +YNGK + I +MI LGEFS T
Sbjct: 42 PSMVGHNISVYNGKNYVPFLILNQMISSKLGEFSRT 77
>UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 152
Score = 35.1 bits (77), Expect = 1.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 358
++P VG ++NGK + V I EM+G LGE+
Sbjct: 45 ILPNFVGLRFSVHNGKNYQDVLITEEMVGRKLGEY 79
>UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19;
n=54; Eukaryota|Rep: Chloroplast 30S ribosomal protein
S19 - Oryza sativa (Rice)
Length = 93
Score = 35.1 bits (77), Expect = 1.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
++P MVG + I+NGK + I M+G LGEF T
Sbjct: 39 ILPAMVGHTIAIHNGKEHIPIYITNPMVGRKLGEFVPT 76
>UniRef50_A7QLC7 Cluster: Chromosome chr11 scaffold_118, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_118, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 86
Score = 34.3 bits (75), Expect = 1.8
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = -1
Query: 218 LLIRRSLFLGATQLLDQCHWFTFKTTSEPPARTGMH*FHELLIGHIKELIEINSPVSELP 39
LL R L +L DQ + +++ EP + G+ +L+ GH ++ I+I++ ELP
Sbjct: 18 LLTRWGLTFRLAKLFDQGRGLSLQSSLEPSSSIGVTELDKLINGHAEKCIQIDTLEVELP 77
Query: 38 E 36
E
Sbjct: 78 E 78
>UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Rep:
AAA ATPase - Bacillus sp. B14905
Length = 569
Score = 33.5 bits (73), Expect = 3.1
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +2
Query: 230 EDSLEKHDLVPEMVGSIVGIYNGKT-----FNQVEIKPEMIGHYLGEFSVTYKPVKHGRP 394
E +EK + + S+VG+ N K N ++I+ + H L F +TY V G P
Sbjct: 290 EQEIEKLQM---QLDSLVGLPNAKKELHNLINFIKIQSLRVDHGLTSFPITYHLVFFGNP 346
Query: 395 GIGATHSSRFI 427
G G T +R I
Sbjct: 347 GTGKTTVARII 357
>UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein S19 - Cafeteria
roenbergensis
Length = 84
Score = 33.5 bits (73), Expect = 3.1
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 391
++P ++ VG+++G TF ++ M+G+ LGEF T + ++G+
Sbjct: 38 ILPLIMNINVGVHDGYTFFKLTPNASMVGYKLGEFVRTRQAFRYGK 83
>UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum
parvifolium|Rep: Ribosomal protein S19 - Gnetum
parvifolium
Length = 115
Score = 33.5 bits (73), Expect = 3.1
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 367
+VPEMVG ++NGK V I M+ LG+F+ T
Sbjct: 56 IVPEMVGYTFAVHNGKEHLPVYITENMLYQKLGDFAPT 93
>UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|Rep:
Ribosomal protein S19 - Saprolegnia ferax
Length = 82
Score = 33.1 bits (72), Expect = 4.1
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 373
++P+ + +YNG+ F +++I +M+G+ GEF T K
Sbjct: 32 IMPQDIDLTFNVYNGQNFIKLKIVKDMLGYKFGEFINTRK 71
>UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2;
Dictyosteliida|Rep: Ribosomal protein S19 -
Dictyostelium discoideum (Slime mold)
Length = 87
Score = 33.1 bits (72), Expect = 4.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 254 LVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 397
+VP + + +YNG+ + V+I + +G LGE+ +T K K+ G
Sbjct: 35 IVPYYLTKTIYVYNGRKYVGVKITEKSLGRKLGEYVLTKKVEKYKASG 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,300,406
Number of Sequences: 1657284
Number of extensions: 8693210
Number of successful extensions: 22013
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 21448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21999
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -