Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40314
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein. 44 7e-04
BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation ... 44 7e-04
BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation ... 44 7e-04
BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation ... 44 7e-04
AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein. 44 7e-04
AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spli... 44 7e-04
AC005081-5|AAS07403.1| 91|Homo sapiens unknown protein. 44 7e-04
X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein. 37 0.064
CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein. 36 0.20
BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation ... 36 0.20
BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation ... 36 0.20
BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation ... 36 0.20
BC001097-1|AAH01097.1| 349|Homo sapiens EIF4B protein protein. 36 0.20
AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation ... 36 0.20
AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation f... 36 0.20
>D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein.
Length = 230
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 47 PTRPDTSGRPKLVLEKRTVKEPVNSLASTSQSSSIFGGARPR 172
PT + + RP+L L+ RTV P+N +A + +S+IFGGARPR
Sbjct: 182 PTEEERAQRPRLQLKPRTVATPLNQVA--NPNSAIFGGARPR 221
>BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 47 PTRPDTSGRPKLVLEKRTVKEPVNSLASTSQSSSIFGGARPR 172
PT + + RP+L L+ RTV P+N +A + +S+IFGGARPR
Sbjct: 180 PTEEERAQRPRLQLKPRTVATPLNQVA--NPNSAIFGGARPR 219
>BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 47 PTRPDTSGRPKLVLEKRTVKEPVNSLASTSQSSSIFGGARPR 172
PT + + RP+L L+ RTV P+N +A + +S+IFGGARPR
Sbjct: 180 PTEEERAQRPRLQLKPRTVATPLNQVA--NPNSAIFGGARPR 219
>BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 47 PTRPDTSGRPKLVLEKRTVKEPVNSLASTSQSSSIFGGARPR 172
PT + + RP+L L+ RTV P+N +A + +S+IFGGARPR
Sbjct: 180 PTEEERAQRPRLQLKPRTVATPLNQVA--NPNSAIFGGARPR 219
>AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein.
Length = 228
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 47 PTRPDTSGRPKLVLEKRTVKEPVNSLASTSQSSSIFGGARPR 172
PT + + RP+L L+ RTV P+N +A + +S+IFGGARPR
Sbjct: 180 PTEEERAQRPRLQLKPRTVATPLNQVA--NPNSAIFGGARPR 219
>AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spliced
product protein.
Length = 248
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 47 PTRPDTSGRPKLVLEKRTVKEPVNSLASTSQSSSIFGGARPR 172
PT + + RP+L L+ RTV P+N +A + +S+IFGGARPR
Sbjct: 200 PTEEERAQRPRLQLKPRTVATPLNQVA--NPNSAIFGGARPR 239
>AC005081-5|AAS07403.1| 91|Homo sapiens unknown protein.
Length = 91
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 47 PTRPDTSGRPKLVLEKRTVKEPVNSLASTSQSSSIFGGARPR 172
PT + + RP+L L+ RTV P+N +A + +S+IFGGARPR
Sbjct: 43 PTEEERAQRPRLQLKPRTVATPLNQVA--NPNSAIFGGARPR 82
>X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein.
Length = 611
Score = 37.1 bits (82), Expect = 0.064
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = +2
Query: 71 RPKLVLEKRTVKEPVNSLASTSQS---SSIFGGARP 169
RPKL L+ R+ E +S ASTSQS +SIFGGA+P
Sbjct: 331 RPKLNLKPRSTPEEDDSSASTSQSTRAASIFGGAKP 366
>CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = +2
Query: 71 RPKLVLEKRTVKEPVNSLASTSQS---SSIFGGARP 169
RPKL L+ R+ + +S ASTSQS +SIFGGA+P
Sbjct: 331 RPKLNLKPRSTPKEDDSSASTSQSTRAASIFGGAKP 366
>BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = +2
Query: 71 RPKLVLEKRTVKEPVNSLASTSQS---SSIFGGARP 169
RPKL L+ R+ + +S ASTSQS +SIFGGA+P
Sbjct: 331 RPKLNLKPRSTPKEDDSSASTSQSTRAASIFGGAKP 366
>BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = +2
Query: 71 RPKLVLEKRTVKEPVNSLASTSQS---SSIFGGARP 169
RPKL L+ R+ + +S ASTSQS +SIFGGA+P
Sbjct: 331 RPKLNLKPRSTPKEDDSSASTSQSTRAASIFGGAKP 366
>BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = +2
Query: 71 RPKLVLEKRTVKEPVNSLASTSQS---SSIFGGARP 169
RPKL L+ R+ + +S ASTSQS +SIFGGA+P
Sbjct: 331 RPKLNLKPRSTPKEDDSSASTSQSTRAASIFGGAKP 366
>BC001097-1|AAH01097.1| 349|Homo sapiens EIF4B protein protein.
Length = 349
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = +2
Query: 71 RPKLVLEKRTVKEPVNSLASTSQS---SSIFGGARP 169
RPKL L+ R+ + +S ASTSQS +SIFGGA+P
Sbjct: 69 RPKLNLKPRSTPKEDDSSASTSQSTRAASIFGGAKP 104
>AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B variant protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = +2
Query: 71 RPKLVLEKRTVKEPVNSLASTSQS---SSIFGGARP 169
RPKL L+ R+ + +S ASTSQS +SIFGGA+P
Sbjct: 331 RPKLNLKPRSTPKEDDSSASTSQSTRAASIFGGAKP 366
>AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation
factor 4B protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = +2
Query: 71 RPKLVLEKRTVKEPVNSLASTSQS---SSIFGGARP 169
RPKL L+ R+ + +S ASTSQS +SIFGGA+P
Sbjct: 331 RPKLNLKPRSTPKEDDSSASTSQSTRAASIFGGAKP 366
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,273,855
Number of Sequences: 237096
Number of extensions: 1929297
Number of successful extensions: 3594
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3579
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -