Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40311
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.1  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   9.1  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 630 SSGYTFMCLCLY 595
           +SGYT   LCLY
Sbjct: 283 ASGYTVTFLCLY 294


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +2

Query: 11  RLSPALHLLRRHEYAHRRLSISFPSSHLLRI 103
           +  P +HL+R      R +S  FP +  + +
Sbjct: 151 KYKPTVHLVRVGTEPRRVISFPFPETQFIAV 181


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = +3

Query: 120 QVFCKHNLQSNVSPENVLAILQVADRMKAADIKE 221
           QVF +   ++++ PE     +++     A+D+ E
Sbjct: 157 QVFARAREEAHIVPEGSRTPIEIPQDFTASDLDE 190


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +2

Query: 200 EGGRHQRIRA*NDRAPFWVVARQEAIKNLGQP 295
           +GGR +  R      P W  AR  +   +G P
Sbjct: 38  QGGRRRAARPGVVTTPRWGCARASSATTMGGP 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,003
Number of Sequences: 336
Number of extensions: 2590
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)