Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40311
(668 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 4.6
AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced prot... 22 4.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.6
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 4.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 6.1
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 6.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 8.0
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 8.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.0
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -2
Query: 664 TSHV*CVLSHSLVGLYIHVFVSLWTY 587
T H+ ++ S + Y+ +FV ++TY
Sbjct: 201 TEHLGYLIFSSTISFYLPLFVMVFTY 226
>AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced protein
75 protein.
Length = 30
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 166 FSGDTLLCRLC 134
F G T+LCR+C
Sbjct: 2 FDGTTVLCRVC 12
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 166 FSGDTLLCRLC 134
F G T+LCR+C
Sbjct: 60 FDGTTVLCRVC 70
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +1
Query: 76 FSKLPFITDSQTIVSKCSASTIYRATCPLRTCSPYFR 186
F L D + C ++ L CSPYFR
Sbjct: 22 FENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFR 58
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 653 IMCPISFSRRAIHSCVCVSM 594
I CPI S R +SC+ V +
Sbjct: 244 ITCPIKVSWRGNYSCLKVDL 263
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 653 IMCPISFSRRAIHSCVCVSM 594
I CPI S R +SC+ V +
Sbjct: 295 ITCPIKVSWRGNYSCLKVDL 314
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 653 IMCPISFSRRAIHSCVCVSM 594
I CPI S R +SC+ V +
Sbjct: 244 ITCPIKVSWRGNYSCLKVDL 263
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 260 ARQEAIKNLGQPLLVD 307
A A+KN QPLLV+
Sbjct: 1026 ADMNALKNFNQPLLVN 1041
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 159 PENVLAILQVADRMKAADIKEYAL 230
P N++AI V + K ADI + +
Sbjct: 71 PPNIIAIPDVVEAAKDADILTFVV 94
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 338 FEVPLPVQPHSLP 376
++ P PVQ H+LP
Sbjct: 216 YKKPTPVQKHALP 228
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 9 FDSLLRYIYYGDTNMPTEDSLYLFQAPIYYGFTNNRLQVFCK 134
FD ++ + PT+ +++ A I G+T +RL K
Sbjct: 234 FDPYVKTPNDEELEKPTDKRMFVLAASIKAGYTIDRLYELTK 275
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 275 LPLASPQPKMVHDHFKR 225
LP +SPQP++ +H R
Sbjct: 1285 LPPSSPQPRLTVNHAYR 1301
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,288
Number of Sequences: 438
Number of extensions: 2868
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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