Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40310
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   6.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   6.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 242 KPSVTAAKNRCPNRLNVSKR*PSLNDVQCK 153
           KP  T +   C NR+N+    P LN   C+
Sbjct: 50  KPGFTGSN--CQNRINLCDSSPCLNGATCQ 77


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 372 LKTSNLKRPSLSRFGIGSHNSTRISLTA 455
           LKT+N KRP  +  G   + S++   T+
Sbjct: 449 LKTANNKRPPSTELGTNIYTSSKRQRTS 476


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 468  CGGGPLLYALASSIVCTPRPVQHTIC 545
            CG  PLL  L + +  TP  +  T C
Sbjct: 2674 CGKHPLLKTLNNELRGTPSDISVTNC 2699


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 366 LYLKTSNLKRPSLSRFGIGSHNSTRISLTAILMICGGGPLL 488
           LY+      R  +S  G+GS     + L  + M+  G P++
Sbjct: 551 LYVDNDCCIRYDVSLSGLGSDRRLELFLELLPMLAPGAPVM 591


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 624 VLIIQFDDKI 653
           ++IIQFDDKI
Sbjct: 378 IVIIQFDDKI 387


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 624 VLIIQFDDKI 653
           ++IIQFDDKI
Sbjct: 304 IVIIQFDDKI 313


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 289 NAPKLRWLVVSHLRL 333
           N  KL+WL  SH R+
Sbjct: 294 NTKKLQWLDTSHNRI 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,305
Number of Sequences: 336
Number of extensions: 3701
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)