Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40309
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   3.8  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   5.1  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   6.7  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   6.7  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   8.9  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   8.9  
AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    23   8.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   8.9  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = -2

Query: 762 PMDRHEARHLSHDMHWDMYATVQLKVTMSVFTGS 661
           P+  H A H + +  WD+        T S  T S
Sbjct: 399 PVSNHSASHSASEQAWDLSCRRSSDATSSTVTSS 432


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 522 KRPGTHHQAPQHRKFLIV 469
           ++P TH  AP  RKF I+
Sbjct: 342 RKPSTHKMAPWVRKFFIL 359


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 406 ELRQLKQSLQHEQSFKSHLHDWVNMHFD 323
           E R L + ++   SF  + H W+ ++FD
Sbjct: 289 EYRYLMKGIETADSFNFNPHKWMLVNFD 316


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 406 ELRQLKQSLQHEQSFKSHLHDWVNMHFD 323
           E R L + ++   SF  + H W+ ++FD
Sbjct: 320 EYRYLMKGIETADSFNFNPHKWMLVNFD 347


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 695 CTVAYMSQCMSCDKCRASCRSMGPTALGGS 784
           C V+++ QC +C+    S  S+    + GS
Sbjct: 29  CAVSFVMQCSTCNAPTDSANSVSCAGVCGS 58


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 334 MHFDTTLAHIASLHAYAIGTTQISATINKTFSTWQDLM 221
           M F TTLA +  LH Y + +   +  I     T  D++
Sbjct: 134 MRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVV 171


>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = -2

Query: 846 LLVDARNTSTCRRTHSQHPVMEPP---NAVGPMDRHEARHLSHDMHWDMYAT 700
           L   A+N S      S+H + + P    A+ P+   E   L H  H + Y T
Sbjct: 17  LFSTAKNCSAVLGCRSKHTLPDLPYDFGALEPVICREIMELHHQKHHNAYVT 68


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 690  STAPSRTCPSACRATNAGPR 749
            ++ P  TC S C+AT   P+
Sbjct: 1982 TSRPLPTCASQCKATEKAPK 2001


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 873,081
Number of Sequences: 2352
Number of extensions: 16929
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)