Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40308
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical pr... 31 0.60
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 31 0.79
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 31 0.79
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 31 0.79
U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical pr... 30 1.4
U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormo... 30 1.4
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 3.2
AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical... 29 3.2
Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z72501-1|CAA96582.1| 584|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41550-2|AAA83285.2| 301|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81586-7|CAB04693.1| 359|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical pr... 28 5.5
U97193-11|AAB52436.1| 214|Caenorhabditis elegans Hypothetical p... 28 5.5
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 28 5.5
AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical ... 28 5.5
AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical ... 28 5.5
AF016446-6|AAC24162.1| 322|Caenorhabditis elegans Serpentine re... 28 5.5
AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical... 28 5.5
Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 28 7.3
AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 28 7.3
AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 28 7.3
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 28 7.3
Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z49207-4|CAA89073.1| 195|Caenorhabditis elegans Hypothetical pr... 27 9.7
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 9.7
U21310-4|AAA62518.1| 165|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 9.7
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 9.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 9.7
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 9.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 9.7
>Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical
protein T22C1.9 protein.
Length = 195
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 113 SLKTNHKSIHSKKNQKSIHTKMNQKSI-HAKKKQKSIH 223
SL + KSI SKK+ KS +K ++K + H K++ +H
Sbjct: 111 SLAKSFKSIRSKKSMKSTKSKKSEKDVGHDDHKKEDVH 148
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 461 DPRTSTERQRNDTGIQE---PAQLESNEHKPVNDHINTNGVDKKARTSNEIKMVHNSNGA 631
D + E Q DT ++E P QLES E++ + ++GV+++ +I+ + S+
Sbjct: 90 DLPANDEAQFEDTILEEDELPDQLESAENQEPRSELVSSGVEEEIIEEEDIEEIEESDYV 149
Query: 632 PKDVIRANDPPEDDLPK 682
+ PE++ P+
Sbjct: 150 EESAPADEPAPEEEKPQ 166
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 461 DPRTSTERQRNDTGIQE---PAQLESNEHKPVNDHINTNGVDKKARTSNEIKMVHNSNGA 631
D + E Q DT ++E P QLES E++ + ++GV+++ +I+ + S+
Sbjct: 90 DLPANDEAQFEDTILEEDELPDQLESAENQEPRSELVSSGVEEEIIEEEDIEEIEESDYV 149
Query: 632 PKDVIRANDPPEDDLPK 682
+ PE++ P+
Sbjct: 150 EESAPADEPAPEEEKPQ 166
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 461 DPRTSTERQRNDTGIQE---PAQLESNEHKPVNDHINTNGVDKKARTSNEIKMVHNSNGA 631
D + E Q DT ++E P QLES E++ + ++GV+++ +I+ + S+
Sbjct: 90 DLPANDEAQFEDTILEEDELPDQLESAENQEPRSELVSSGVEEEIIEEEDIEEIEESDYV 149
Query: 632 PKDVIRANDPPEDDLPK 682
+ PE++ P+
Sbjct: 150 EESAPADEPAPEEEKPQ 166
>U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical
protein C18B2.5b protein.
Length = 699
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 62 GRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQK 241
G + + E +RP S ++ S++S Q S HT QK + +++ + H K Q
Sbjct: 275 GEEINLHHDEVAYERPRSELSSPGSVYSSHTQASFHTGGTQKLRNLQRQVEDAHAKKAQL 334
Query: 242 S 244
S
Sbjct: 335 S 335
>U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical
protein C18B2.5a protein.
Length = 673
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 62 GRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQK 241
G + + E +RP S ++ S++S Q S HT QK + +++ + H K Q
Sbjct: 249 GEEINLHHDEVAYERPRSELSSPGSVYSSHTQASFHTGGTQKLRNLQRQVEDAHAKKAQL 308
Query: 242 S 244
S
Sbjct: 309 S 309
>AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 166 protein.
Length = 363
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 160 IDTYQNESEIDTCKKETEIDTYKNEPEIDAPNMNRK 267
IDTY+N S +D ++E+ + Y I N RK
Sbjct: 125 IDTYENPSFVDLVRQESRLSCYLRPKNISWENTERK 160
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +2
Query: 35 TRTKRRWTFGRKSTTNTTESGMKRPTSLKT--NHKSIHSKKNQKSIHTKMNQKSIHAKKK 208
T T T+ TTE + T+ K HKS + TK + K H K K
Sbjct: 195 TEASEEATTTSSETSETTEESEEEETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTK 254
Query: 209 QKSIHT 226
++ + T
Sbjct: 255 EEKVTT 260
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = +2
Query: 71 STTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQKSMR 250
S+++++ S +S ++ +S KK +K H K + K H KK S + + S
Sbjct: 294 SSSSSSSSSSSSSSSSSSSSESEDEKKKKKVHHKKSHGKKHH--KKAASSSSSSSSSSSS 351
Query: 251 PT*TGNSVRYRDSGHNPSH 307
+ + +S + H P+H
Sbjct: 352 SSSSSSSESEDEKKHAPAH 370
>AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical
protein Y71A12B.15 protein.
Length = 758
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 440 QSLGAIVVFKECGSCDLRFNFGSVDLVRVTHDFCPLFGNAGLFVHDLG-YDHCLDN 276
Q L +V+ K GSC +F G+ + +++ FC F L + +G +H + N
Sbjct: 74 QKLETLVIGKLDGSCSDKFTSGAGEFLKIACRFCTAFVGVTLTWNIVGLLEHIIKN 129
>Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical
protein ZK262.10 protein.
Length = 335
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Frame = -1
Query: 253 WAHRFL-----VHFCMYRFLFLFCMYRFL-IHFGMYRFLVLF 146
WAH ++ V + LF+F + +HFG YRFL++F
Sbjct: 5 WAHHYIPKIGGVFSIIINLLFIFIAHDDKHVHFGNYRFLLIF 46
>Z72501-1|CAA96582.1| 584|Caenorhabditis elegans Hypothetical
protein C04C11.2 protein.
Length = 584
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 366 IDRAEVETQITTTTLLENNDGSQTLIVTEKTETPEQAPSVKE 491
I+ + +T I TTT+ ++ DGS++ +V E T T +++E
Sbjct: 544 IEHGDTKT-IKTTTVTKHADGSESTLVQENTTTETVTTTLEE 584
>U41550-2|AAA83285.2| 301|Caenorhabditis elegans Hypothetical
protein R04A9.3 protein.
Length = 301
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +1
Query: 64 EKIYDKHYRIWD----ETTNQSKNEPQIDTFKKEP--EIDTYQNESEIDTCKKETEIDTY 225
E+ Y KHY+ + ETT Q N ++ TFK +P + + + D + +ID+
Sbjct: 198 ERNYTKHYKTFGLLPKETTRQLSNGRELLTFKYQPPTTLTSIDDSENSDDDSDDEKIDSN 257
Query: 226 KNEPE 240
E E
Sbjct: 258 NAERE 262
>Z81586-7|CAB04693.1| 359|Caenorhabditis elegans Hypothetical
protein T05F1.9 protein.
Length = 359
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 7 LNSELTL-ISNPDQEKMDFWEKIYDKHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNES 183
LN E + I D FW + H+ +W + + +P D K EID +E
Sbjct: 297 LNCEFVMDIQRDDGMLASFWRREQSFHFVVWHDRHPIATLQPDPDLLLKLEEIDFASDED 356
Query: 184 E 186
+
Sbjct: 357 D 357
>Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical
protein AC3.2 protein.
Length = 525
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +1
Query: 22 TLISNPDQEKMDFWEKIYDKHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNESEI 189
T+ N + +KMDFW++ ++ + +I ++ + + F+K I + N EI
Sbjct: 181 TIEENDNGDKMDFWQRTFNLYMKIGSILIHRYGTDGTTEVFRK--YIPDFPNVREI 234
>U97193-11|AAB52436.1| 214|Caenorhabditis elegans Hypothetical
protein C06A5.2 protein.
Length = 214
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +1
Query: 79 KHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKE----TEIDTYKNEPEID 246
K + + + KNE Q++ K+PE QN+S D KKE E D + + E
Sbjct: 32 KKFPMMNMIVKNKKNEVQVE---KKPEEVPEQNKSVKDQTKKEEVKVVEEDKVEKKVEQK 88
Query: 247 APNMNRK*C 273
P +NR C
Sbjct: 89 KPIINRPNC 97
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 46 EKMDFWEKIYDKHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKETEIDTY 225
E D+W K++DK + T++ + K P I E +D + EI
Sbjct: 103 EDPDYWRKVFDKQTGTDVKLTDEQIEKIHNIATGKYPTIGYNPYEPFLDIFSSQKEIHPI 162
Query: 226 KNEPE 240
N PE
Sbjct: 163 DNRPE 167
>AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical
protein Y52B11A.3b protein.
Length = 516
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 22 TLISNPDQEKMDFWEKIY 75
T ISNPD +K+DF KIY
Sbjct: 317 TPISNPDPQKIDFMIKIY 334
>AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical
protein Y52B11A.3a protein.
Length = 552
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 22 TLISNPDQEKMDFWEKIY 75
T ISNPD +K+DF KIY
Sbjct: 353 TPISNPDPQKIDFMIKIY 370
>AF016446-6|AAC24162.1| 322|Caenorhabditis elegans Serpentine
receptor, class h protein20 protein.
Length = 322
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = -3
Query: 254 LGASISGSFLYVSISVSFLHVSISDSFWYVSISGSFLNVSICGSFLDWLVVSSQIL*CLS 75
LG S S F S+++++ SIS+ F++ + F+ LV + + LS
Sbjct: 86 LGVSGSIQFNLFSVALAYNGASISELFYFRYKASVSYKEHKFTHFIQVLVYTIRTFALLS 145
Query: 74 *IFSQKSIFSWSGFEIKVNSEF 9
IFS ++ S F++ S+F
Sbjct: 146 LIFSLATMHETSRFQLAQKSDF 167
>AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical
protein Y119C1B.1 protein.
Length = 273
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/64 (20%), Positives = 36/64 (56%)
Frame = +2
Query: 65 RKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQKS 244
R+S ++ + +R + + +H+S + K++++ ++K + + +KS ++ +QKS
Sbjct: 83 RRSMKSSRDRKSRRSSKDRKSHRSSNRKRDREDDVRDGSRKGVRDGRSRKSGKSRKSQKS 142
Query: 245 MRPT 256
+ T
Sbjct: 143 QKST 146
>Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical
protein F25H9.3 protein.
Length = 352
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +1
Query: 70 IYDKHYRIWDETTNQSKNEPQ--IDTFKKEPEIDTYQN--ESEIDTCKKETEIDTYKN 231
++ HY + + T ++ N+P+ I P + Y + ++++D K ET+ D Y+N
Sbjct: 179 LHSFHYSTYCKCTTKNCNDPEAPIPYPISSPTVSCYTSGYDAKVDNAKYETDGDFYEN 236
>AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 387 TQITTTTLLENNDGSQTLIVTEKTETPEQ 473
T TT+T + DGS T+ + T TPEQ
Sbjct: 205 TPTTTSTTTASPDGSTTISPSSTTPTPEQ 233
>AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 387 TQITTTTLLENNDGSQTLIVTEKTETPEQ 473
T TT+T + DGS T+ + T TPEQ
Sbjct: 205 TPTTTSTTTASPDGSTTISPSSTTPTPEQ 233
>AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 387 TQITTTTLLENNDGSQTLIVTEKTETPEQ 473
T TT+T + DGS T+ + T TPEQ
Sbjct: 205 TPTTTSTTTASPDGSTTISPSSTTPTPEQ 233
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 77 TNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKM-NQKSIHAKKKQKS 217
TN TE M K K I SK + + K+ ++KS+ KKKQKS
Sbjct: 155 TNETEIAMMYGDKKKKYKKKISSKNKENCQNFKLLSEKSVR-KKKQKS 201
>Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical
protein F58B3.5 protein.
Length = 917
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 65 SQKSIFSWSGFEIKVNSE 12
SQ + FSW F +KVNSE
Sbjct: 402 SQDTAFSWDDFVLKVNSE 419
>Z49207-4|CAA89073.1| 195|Caenorhabditis elegans Hypothetical
protein R07E3.7 protein.
Length = 195
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 28 ISNPDQEKMDFWEKIYDKHYRIWDETTNQSK 120
++ PD+ +DF +I++ H + + TN K
Sbjct: 131 VTTPDRPSIDFLNEIHESHAKTKESKTNDDK 161
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 130 QIDTFKKEPEIDTYQNESEIDTCKKETEIDTYKNEPEIDAPN 255
Q++T KK EI Y+N EI K N+P++ P+
Sbjct: 4511 QVETNKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPD 4552
>U21310-4|AAA62518.1| 165|Caenorhabditis elegans Hypothetical
protein F40H6.1 protein.
Length = 165
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 269 YFRFM-LGASISGSFLYVSISVSFL---HVSISDSFWYVSISGSFLNVSICG 126
+F F+ +I G+ + +IS + ++S+ S W+ + G F N + CG
Sbjct: 102 FFGFLGCSGTIIGTTILATISFAIAKDSNMSMGSSMWFCLVGGVFFNGAACG 153
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 130 QIDTFKKEPEIDTYQNESEIDTCKKETEIDTYKNEPEIDAPN 255
Q++T KK EI Y+N EI K N+P++ P+
Sbjct: 3871 QVETNKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPD 3912
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 130 QIDTFKKEPEIDTYQNESEIDTCKKETEIDTYKNEPEIDAPN 255
Q++T KK EI Y+N EI K N+P++ P+
Sbjct: 4511 QVETNKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPD 4552
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 130 QIDTFKKEPEIDTYQNESEIDTCKKETEIDTYKNEPEIDAPN 255
Q++T KK EI Y+N EI K N+P++ P+
Sbjct: 4511 QVETNKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPD 4552
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 130 QIDTFKKEPEIDTYQNESEIDTCKKETEIDTYKNEPEIDAPN 255
Q++T KK EI Y+N EI K N+P++ P+
Sbjct: 3871 QVETNKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPD 3912
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 130 QIDTFKKEPEIDTYQNESEIDTCKKETEIDTYKNEPEIDAPN 255
Q++T KK EI Y+N EI K N+P++ P+
Sbjct: 4511 QVETNKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPD 4552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,865,447
Number of Sequences: 27780
Number of extensions: 352719
Number of successful extensions: 1533
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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