Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40308
(697 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 28 0.074
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 27 0.23
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 1.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 24 1.6
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 24 1.6
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 23 3.7
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 6.4
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 21 8.5
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 21 8.5
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 21 8.5
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 21 8.5
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 28.3 bits (60), Expect = 0.074
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +1
Query: 34 NPDQEKMDFWEKIYDKHYRIWDETTNQSKN----EPQIDTFKKEPEIDTYQNESEIDTCK 201
N + K +EK++++ ++ +E TN+ +N E + +++K E E Y+ S+ + +
Sbjct: 9 NREYRKDRRYEKLHNEKEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSK-ERSR 67
Query: 202 KETEIDTYKNEPEI 243
TE + EP+I
Sbjct: 68 DRTERER-SREPKI 80
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.6 bits (56), Expect = 0.23
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 34 NPDQEKMDFWEKIYDKHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNESE 186
N + K +EK++++ ++ +E TN+ +N + +E E ++Y+NE E
Sbjct: 9 NREYRKDRRYEKLHNEKEKLLEERTNRKRN-----SRSREREQNSYKNERE 54
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 168 CIDFWFFFECIDLWFVFRLVGRFIPDSVVFVVDFLP 61
C+ F FFECI + + F V RF D + ++ + P
Sbjct: 454 CLLFLMFFECIAISWAFG-VNRFY-DGIRDMIGYYP 487
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 168 CIDFWFFFECIDLWFVFRLVGRFIPDSVVFVVDFLP 61
C+ F FFECI + + F V RF D + ++ + P
Sbjct: 507 CLLFLMFFECIAISWAFG-VNRFY-DGIRDMIGYYP 540
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 245 SISGSFLYVSISVSFLHVSISDSFWYVSISGS--FLNVSICGSFLDW 111
S G V+ S+ + ++ +I+GS F+N+ + GS LDW
Sbjct: 642 SYIGVLTLVATSMPTYICYLGKAYLMYAIAGSQCFINIWLLGSRLDW 688
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/34 (20%), Positives = 21/34 (61%)
Frame = +2
Query: 125 NHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHT 226
NHKSI+ +++ K+ + + + +++++ H+
Sbjct: 50 NHKSIYHRQHSKNEQQRKEMEQMREREREQREHS 83
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 307 MTWVMTTVSITDTISGSCW 251
+T+V TVS T T+S W
Sbjct: 101 LTFVNDTVSFTTTVSARFW 119
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 6.4
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 28 ISNPDQEKMDFWEKIYD 78
+ NP Q+ +D W +Y+
Sbjct: 616 VINPHQQHLDQWNWVYE 632
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 380 FGSVDLVRVTHDFCPLFGNAGLFVHDL 300
F D THD CP +AG H L
Sbjct: 52 FKHTDACCRTHDMCPDVMSAGESKHGL 78
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 380 FGSVDLVRVTHDFCPLFGNAGLFVHDL 300
F D THD CP +AG H L
Sbjct: 57 FKHTDACCRTHDMCPDVMSAGESKHGL 83
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 511 FLNSSIISLTLGACSGVSVFSVTIKV 434
FLN + I+ + CS +S +V +K+
Sbjct: 91 FLNENEINQLITECSAISDTNVHLKI 116
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 380 FGSVDLVRVTHDFCPLFGNAGLFVHDL 300
F D THD CP +AG H L
Sbjct: 57 FKHTDACCRTHDMCPDVMSAGESKHGL 83
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,912
Number of Sequences: 438
Number of extensions: 4736
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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