Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40305
(526 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 141 1e-32
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 133 2e-30
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 112 5e-24
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 98 1e-19
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 87 3e-16
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 86 5e-16
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 85 9e-16
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 83 5e-15
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 79 5e-14
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 75 8e-13
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 74 2e-12
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 64 2e-09
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 62 1e-08
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 54 3e-06
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 47 2e-04
UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microsci... 47 2e-04
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 47 3e-04
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 45 0.001
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 45 0.001
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 44 0.002
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 42 0.011
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 42 0.011
UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28; Bacteri... 41 0.015
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 40 0.026
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 40 0.046
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 40 0.046
UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellula... 38 0.11
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 38 0.14
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 38 0.14
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 38 0.19
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 37 0.25
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 37 0.33
UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellula... 36 0.43
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 36 0.57
UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellul... 36 0.75
UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellula... 35 1.00
UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep:... 34 2.3
UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; cor... 33 3.0
UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1; Ba... 33 3.0
UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;... 33 3.0
UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular... 33 3.0
UniRef50_Q4TB52 Cluster: Chromosome 13 SCAF7203, whole genome sh... 33 4.0
UniRef50_Q1D1P4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole geno... 33 5.3
UniRef50_Q4DU87 Cluster: Amastin, putative; n=70; Trypanosoma cr... 33 5.3
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 33 5.3
UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9; Bacteria... 33 5.3
UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p - ... 32 7.0
UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20; Bacteri... 32 7.0
UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66; Bacteri... 32 7.0
UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1; Fusobact... 32 9.3
UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella a... 32 9.3
UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_A7RAF3 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 141 bits (341), Expect = 1e-32
Identities = 62/81 (76%), Positives = 76/81 (93%)
Frame = +2
Query: 11 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 190
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 191 VDIRVTVKGGGHVEQVYAIRQ 253
VDIRV VKGGGHV Q+YAIRQ
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQ 86
Score = 121 bits (291), Expect = 1e-26
Identities = 55/60 (91%), Positives = 59/60 (98%)
Frame = +1
Query: 253 SISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 432
SISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 133 bits (322), Expect = 2e-30
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +2
Query: 5 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 184
+E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ +EP L+YKL EPILLLGKE+F
Sbjct: 6 KEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKERF 65
Query: 185 SMVDIRVTVKGGGHVEQVYAIRQVFQR 265
+ VDIR+ VKGGG+V Q+YAIRQ +
Sbjct: 66 AGVDIRIRVKGGGNVAQIYAIRQAISK 92
Score = 119 bits (286), Expect = 5e-26
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +1
Query: 253 SISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 432
+ISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLVADPRRCEPKKFGGPGARARYQKSYR
Sbjct: 89 AISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 112 bits (269), Expect = 5e-24
Identities = 49/84 (58%), Positives = 67/84 (79%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 193
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LVEP +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 194 DIRVTVKGGGHVEQVYAIRQVFQR 265
DIRV V GGGHV QVYAIRQ +
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQAIAK 87
Score = 89.4 bits (212), Expect = 4e-17
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = +1
Query: 253 SISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 432
+I+K L+A++QKYVDE SK E+K YDR+LL+AD RR EPKKFGG GAR+R+QKSYR
Sbjct: 84 AIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 97.9 bits (233), Expect = 1e-19
Identities = 44/60 (73%), Positives = 52/60 (86%)
Frame = +1
Query: 253 SISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 432
+I+K+L+A+YQKYVDE SK ++K VQYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 96 AIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
Score = 54.0 bits (124), Expect = 2e-06
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2
Query: 152 EPILLLGKEKFSMVDIRVTVKGGGHVEQVYAIRQVFQR 265
EP+L++G +KF+ VDIRV V GGGH QVYAIRQ +
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQAIAK 99
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 86.6 bits (205), Expect = 3e-16
Identities = 51/145 (35%), Positives = 70/145 (48%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 193
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 194 DIRVTVKGGGHVEQVYAIRQVFQRL*SPSTRNM*TKPQRRKSKTS*FNTIGVCWWLTXXX 373
DI V VKG GHV Q+YA+ Q + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 374 XXXXXXXXXXXXXDTRNLTVKPSRK 448
TRN + KP +K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 85.8 bits (203), Expect = 5e-16
Identities = 38/81 (46%), Positives = 53/81 (65%)
Frame = +2
Query: 23 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIR 202
V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+ F +D+
Sbjct: 25 VHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMN 84
Query: 203 VTVKGGGHVEQVYAIRQVFQR 265
+ V GGGHV Q+YA+RQ R
Sbjct: 85 IKVAGGGHVSQIYAVRQAISR 105
Score = 72.1 bits (169), Expect = 7e-12
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +1
Query: 253 SISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 432
+IS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE KKFGG GARAR QKSYR
Sbjct: 102 AISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 85.0 bits (201), Expect = 9e-16
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +1
Query: 253 SISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 432
+I+K+L+A+Y KY D AS E++ + V YDR+LL+AD RR EPKKFGG GARAR QKSYR
Sbjct: 140 AIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFGGHGARARRQKSYR 199
Score = 79.4 bits (187), Expect = 5e-14
Identities = 31/56 (55%), Positives = 49/56 (87%)
Frame = +2
Query: 20 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFS 187
+V FG+KKTATAVA+CK G G++R+NG+P+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 185 SMVDIRVTVKGGGHVEQVYAIRQVFQR 265
S VDIR+ V GGG Q+YAIRQ +
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQAIAK 143
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 82.6 bits (195), Expect = 5e-15
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +1
Query: 253 SISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 432
+ +KA++AFY Y DE K+EI+ L+ +DR LVAD R+ EPKKFGGPGARARYQKSYR
Sbjct: 86 AFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQKSYR 145
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVAYCKR-GHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 190
+++V G+KK A A C + G +R+N P L+ L+ KL+E I ++ +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 191 VDIRVTVKGGGHVEQVYAIRQVFQR 265
+ +T K GG V +VYA+R F +
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAK 89
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 79.4 bits (187), Expect = 5e-14
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +1
Query: 253 SISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 432
+I+K LIAF+QKY +E K +KD + YD+ LL+ADPRRCEPKK+G AR R+ KSYR
Sbjct: 90 AIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPRRCEPKKWGRHSARTRFTKSYR 149
Score = 67.3 bits (157), Expect = 2e-10
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 190
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 191 VDIRVTVKGGGHVEQVYAIRQVFQR 265
+ I V V GGG V Q YA RQ +
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQAIAK 93
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 75.4 bits (177), Expect = 8e-13
Identities = 32/84 (38%), Positives = 56/84 (66%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 193
++ +Q G++KTA A A + G G +R+NG+P++++EP + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 194 DIRVTVKGGGHVEQVYAIRQVFQR 265
DI V V+GGG + Q A R R
Sbjct: 61 DIDVKVQGGGFMGQAEAARIAIAR 84
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +1
Query: 265 ALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 432
A IA + V+ +K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 73.7 bits (173), Expect = 2e-12
Identities = 32/77 (41%), Positives = 50/77 (64%)
Frame = +2
Query: 23 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIR 202
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP +LG + ++
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 203 VTVKGGGHVEQVYAIRQ 253
+ KGGG V Q+YAIRQ
Sbjct: 63 IFSKGGGKVSQIYAIRQ 79
Score = 70.1 bits (164), Expect = 3e-11
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 253 SISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 432
SISK L+ +Y KY+ + +K + YD+ LL++D R EPKK+GG GARAR+QKSYR
Sbjct: 80 SISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKKYGGLGARARFQKSYR 139
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 64.1 bits (149), Expect = 2e-09
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +2
Query: 11 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPRLLQYKLQEPILLLGKEKFS 187
P+Q+ QVFG KK A +A +G +++V L++ EP QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 188 MVDIRVTVKGGGHVEQVYAI 247
V I V V G G V Q+YAI
Sbjct: 83 RVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 214
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+VDIRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 215 GGGHVEQVYAIRQVFQR 265
GGG + Q A+R R
Sbjct: 71 GGGVMGQADAVRMAIAR 87
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/49 (42%), Positives = 36/49 (73%)
Frame = +1
Query: 286 KYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 432
+ +D+ S+ +++ +++DR++LV DPRR EP+K+ AR R+QKSYR
Sbjct: 104 RMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = +1
Query: 250 TSISKALIAFYQKY-------VDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 408
T IS+ALI + + + + ++++++ + +D+ L+ D RR EPKKFGGPGAR
Sbjct: 82 TGISRALIGWTKSRREPRNHPLTKTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGAR 141
Query: 409 ARYQKSYR 432
R QKSYR
Sbjct: 142 RRKQKSYR 149
Score = 41.9 bits (94), Expect = 0.009
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +2
Query: 32 FGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 211
F +K A+A Y +G G +R+N P +++ + + P+ + G + VDI V V
Sbjct: 10 FATRKAASAHVYIIKGTGRVRINNVPAEMIVHESAREAILAPLDIAGDAR-KKVDISVRV 68
Query: 212 KGGGHVEQVYA 244
KGGG + Q A
Sbjct: 69 KGGGFMGQAGA 79
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 47.2 bits (107), Expect = 2e-04
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 211
GR+KT+TA + +G G + VNG+PLD R + +++P+ LL + DI TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 212 KGGGHVEQVYAIRQVFQR 265
KGGG Q AIR R
Sbjct: 66 KGGGINGQAGAIRHGITR 83
>UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microscilla
marina ATCC 23134|Rep: 30S ribosomal protein S9 -
Microscilla marina ATCC 23134
Length = 172
Score = 47.2 bits (107), Expect = 2e-04
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLL-GKEKFS 187
++ + GR+KT+ A Y + G G + VN R P +LQ +++PI+ + EKF
Sbjct: 7 VKIINTIGRRKTSIARVYLQEGSGQITVNKRDFAEYFPTDVLQTIVKQPIVAVDANEKF- 65
Query: 188 MVDIRVTVKGGGHVEQVYAIRQVFQR 265
DIR V GGG Q A+R R
Sbjct: 66 --DIRANVTGGGVAGQAEALRHAIAR 89
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 46.8 bits (106), Expect = 3e-04
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 208
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E DI V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 209 VKGGGHVEQVYAIR 250
V GGG Q AI+
Sbjct: 69 VLGGGFAAQADAIK 82
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 45.2 bits (102), Expect = 0.001
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 211
GR+KT+ A G G + VNG P L+ L L++P++ G EK DI VTV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEKD--FDITVTV 68
Query: 212 KGGGHVEQVYAIR 250
KGGG Q A R
Sbjct: 69 KGGGFTGQAGATR 81
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 45.2 bits (102), Expect = 0.001
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 23 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILL-LGKEKFSMVD 196
+ GR+KTA A Y K G G+++VN P + LL K+ +P+LL + KF D
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKF---D 64
Query: 197 IRVTVKGGGHVEQVYAIRQVFQR 265
+ V GGG Q AI R
Sbjct: 65 FYIKVSGGGINSQAEAISLAISR 87
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 5 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 97
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 211
GR+KT++A + + G G + +NG PLD R + +++P++ L + S D+ TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 212 KGGGHVEQVYAIRQVFQR 265
+GGG Q AIR R
Sbjct: 71 QGGGDSGQAGAIRHGITR 88
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 41.5 bits (93), Expect = 0.011
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 211
GR+KTA A K G G L +NG+ L D + + ++ P L E F VD+ V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 212 KGGGHVEQVYAI 247
GGG Q AI
Sbjct: 139 TGGGTTGQTGAI 150
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 41.5 bits (93), Expect = 0.011
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +2
Query: 11 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPR--LLQYKLQEPILLLGKEK 181
P + + GR+KT+ A A K G G + VN + + D ++ R +++ ++ LL ++K
Sbjct: 10 PAKEIWAVGRRKTSVARAKIKEGSGKITVNHKDIKDYLQNRKAIIEEAIRPLSLLNVQDK 69
Query: 182 FSMVDIRVTVKGGGHVEQVYAIRQVFQR 265
+ D+ + V GGG QV AIR R
Sbjct: 70 Y---DLNLNVTGGGTTGQVGAIRHALAR 94
>UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28;
Bacteria|Rep: 30S ribosomal protein S9 - Idiomarina
loihiensis
Length = 130
Score = 41.1 bits (92), Expect = 0.015
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGK-EKFSMVDIRVT 208
GR+K +TA + + G G +++N R L+ R Q +++P+ L+ EKF D+ +T
Sbjct: 10 GRRKNSTARVFLRPGSGNIKINNRELNEYFGRETAQMVVRQPLELVEMTEKF---DMYIT 66
Query: 209 VKGGGHVEQVYAIRQVFQR 265
V GGG Q AIR R
Sbjct: 67 VSGGGTTGQAGAIRHGITR 85
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 40.3 bits (90), Expect = 0.026
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 211
GR+K A G G + NGR L D +L Q ++ P++LLG+E DI +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 212 KGGGHVEQVYAIRQVFQR 265
GGG Q A R R
Sbjct: 120 GGGGPTGQAGAFRLAIAR 137
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 39.5 bits (88), Expect = 0.046
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +2
Query: 35 GRKKTATAVAYC--KRGHGMLRVNGR-PLDLVEPRLLQYKLQEPILLLG-KEKFSMVDIR 202
GR+K++TA Y + G + +N R P D +L+ +++P+ L K+ F DI
Sbjct: 10 GRRKSSTAKVYLYQSKDKGKITINHRNPSDYFPNKLVIQDMEQPLELTKLKDNF---DIN 66
Query: 203 VTVKGGGHVEQVYAIR 250
V VKGGG Q AIR
Sbjct: 67 VVVKGGGFTGQAGAIR 82
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 39.5 bits (88), Expect = 0.046
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 211
GR+K + A G G + +NGR LD L+ +++P++ G E D+RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 212 KGGGHVEQVYAIRQVFQR 265
GGG Q AIR R
Sbjct: 68 DGGGFTGQAGAIRHGIAR 85
>UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellular
organisms|Rep: 30S ribosomal protein S9 - Mesorhizobium
sp. (strain BNC1)
Length = 160
Score = 38.3 bits (85), Expect = 0.11
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 211
G++K A A + K G G + VN + R +LQ LQ+PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKILVNDKEFTQYFARPVLQMILQQPIVATNRN--GQYDIVATV 97
Query: 212 KGGGHVEQVYAIRQVFQR 265
GGG Q A+R R
Sbjct: 98 VGGGLSGQAGAVRHGISR 115
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 37.9 bits (84), Expect = 0.14
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQ-YKLQEPILLLGKEK 181
+ IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLG--D 60
Query: 182 FSMVDIRVTVKGGGHVEQVYAIR 250
+ D+ + V GGG QV A R
Sbjct: 61 VNSFDLIIRVSGGGVQGQVIATR 83
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 37.9 bits (84), Expect = 0.14
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPR-LLQYKLQEPILLLG-KEKFSMVDIRV 205
GR+KT+ A G+G +NG ++ ++ + L + +QEP+ L K +F+++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 206 TVKGGGHVEQVYAIR 250
VKGGG V QV AI+
Sbjct: 77 KVKGGGLVGQVNAIK 91
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 37.5 bits (83), Expect = 0.19
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 211
GR+K + A + K+G G + VNGR +D + ++ P ++ + + D+R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 212 KGGGHVEQVYAI 247
GGGH Q A+
Sbjct: 87 AGGGHTGQAGAM 98
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 37.1 bits (82), Expect = 0.25
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 211
GR+K++ A Y + G G ++VN R D ++ L+ P++L D+ + V
Sbjct: 16 GRRKSSVARVYIREGSGNIKVNNRDFDSYIQLENLRTMALSPLVL--TNTLGKYDLYINV 73
Query: 212 KGGGHVEQVYAIRQVFQR 265
GGG Q AIR R
Sbjct: 74 YGGGISGQSGAIRHGISR 91
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 36.7 bits (81), Expect = 0.33
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 214
G++KT++AV + G G + VNG+ L PR L + L + ++ TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 215 GGGHVEQVYAI 247
GGG Q A+
Sbjct: 254 GGGVTGQAEAV 264
>UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellular
organisms|Rep: 30S ribosomal protein S9 - Anabaena sp.
(strain PCC 7120)
Length = 138
Score = 36.3 bits (80), Expect = 0.43
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQY--KLQEPILLLGKEKFSMVDIRVT 208
GR+K+A A G G L VNG+P DL Y ++ P+ LG E + DI V
Sbjct: 17 GRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLE--NEYDILVK 74
Query: 209 VKGGGHVEQVYAIR 250
+GGG Q ++R
Sbjct: 75 AEGGGLTGQADSVR 88
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 35.9 bits (79), Expect = 0.57
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 35 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 211
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 212 KGGGHVEQVYAIR 250
GGG Q AIR
Sbjct: 333 SGGGRSAQAGAIR 345
>UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellular
organisms|Rep: 30S ribosomal protein S9 - Rhizobium loti
(Mesorhizobium loti)
Length = 160
Score = 35.5 bits (78), Expect = 0.75
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 211
G++K A A + K G G + VN + R +LQ L +PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKIVVNDKEFATYFARPVLQMILNQPII--ASNRSGQYDIVATV 97
Query: 212 KGGGHVEQVYAIR 250
GGG Q A+R
Sbjct: 98 VGGGLSGQAGAVR 110
>UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellular
organisms|Rep: 30S ribosomal protein S9 - Streptomyces
avermitilis
Length = 173
Score = 35.1 bits (77), Expect = 1.00
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 8 EPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKF 184
EP Q GR+K A A G G ++NGR L D ++ Q ++ EP +L E
Sbjct: 44 EP-QPAAGLGRRKNAIARVRIVPGTGKWKINGRTLEDYFPNKVHQQEVNEPFKVLELE-- 100
Query: 185 SMVDIRVTVKGGGHVEQVYAIR 250
D+ + GGG Q A+R
Sbjct: 101 GRYDVIARISGGGVSGQAGALR 122
>UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep: 9S
ribosomal protein - Zea mays (Maize)
Length = 221
Score = 33.9 bits (74), Expect = 2.3
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 17 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLV---EPRLLQYKLQEPILLLGKEKFS 187
Q + GR+KTA A + G G + +N R P ++Y + P++ LG EK
Sbjct: 94 QRITATGRRKTAIARVVLQEGTGKVFINFRDAKEYLQGNPMWMEY-CKVPLMTLGFEK-- 150
Query: 188 MVDIRVTVKGGGHVEQVYAI 247
D+ V V GGG Q AI
Sbjct: 151 NYDVFVKVHGGGLSGQAQAI 170
>UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; core
eudicotyledons|Rep: 30S ribosomal protein S9-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 33.5 bits (73), Expect = 3.0
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 214
GR+K + A + + G G +VN + D+ P +L ++ L + DI+ TVK
Sbjct: 23 GRRKCSIARVWIQPGEGKFQVNEKEFDVYFP-MLDHRAALLRPLAETKTLGRWDIKCTVK 81
Query: 215 GGG 223
GGG
Sbjct: 82 GGG 84
>UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S9, putative -
Babesia bovis
Length = 683
Score = 33.5 bits (73), Expect = 3.0
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +2
Query: 8 EPIQAVQVF--GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGK-E 178
EP++ +V+ G +KT+ AV Y + G+G + +N R R ++L+E + L
Sbjct: 550 EPVKFTKVYERGSRKTSVAVVYLEPGNGHIIINDRD-GYQYVRYCTHRLREILEPLDSIY 608
Query: 179 KFSMVDIRVTVKGGGHVEQVYAIRQVFQR 265
+ +I V GGG Q AIR R
Sbjct: 609 AYKRFNIVARVNGGGISGQSGAIRHALCR 637
>UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;
Pezizomycotina|Rep: Contig An15c0060, complete genome -
Aspergillus niger
Length = 221
Score = 33.5 bits (73), Expect = 3.0
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPIL-LLGKEKFSMVDIRVTV 211
G++K ++AV G G + VNG+ L+ PRL + + + L + ++ TV
Sbjct: 101 GKRKASSAVVQLVEGEGEVLVNGKTLNEAFPRL--HDRESAVWPLRCTSRLDKYNVWATV 158
Query: 212 KGGGHVEQVYAI 247
+GGG Q AI
Sbjct: 159 RGGGVTGQAEAI 170
>UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular
organisms|Rep: 30S ribosomal protein S9 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 137
Score = 33.5 bits (73), Expect = 3.0
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGR-PLDLVEPRLLQYKL-QEPILLLGKEKFSMVDIRVT 208
GR+K+A A G G L +NGR D ++ + L + P+ LG E + DI V
Sbjct: 16 GRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLE--NSYDIYVN 73
Query: 209 VKGGGHVEQVYAIR 250
GGG Q AIR
Sbjct: 74 ATGGGLTGQADAIR 87
>UniRef50_Q4TB52 Cluster: Chromosome 13 SCAF7203, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 13
SCAF7203, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1946
Score = 33.1 bits (72), Expect = 4.0
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 166 ARQGKILYGRHQSDSQGWWSCRTSLRYPTSISKALIAFYQKYVDEASKKEIKDILVQYDR 345
A++ K +GR ++ W C L+ + +A F+Q V+ + E +++L +R
Sbjct: 1211 AQRSKRQWGRLETRVAFWKRCHQRLKGDGADPEAAFGFFQAQVEPGGRSEAEELLDVQER 1270
Query: 346 SLLV 357
SLL+
Sbjct: 1271 SLLL 1274
>UniRef50_Q1D1P4 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 496
Score = 32.7 bits (71), Expect = 5.3
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = -1
Query: 424 ISGIWHGHLDHRTSWARSDAGQPPANSYRIELGCL*FPSLRLRLHISGRRRSEPLKYLSD 245
I G+ G + HRT+ A D G+P R L L P + ++ GRR+++ L +
Sbjct: 181 IGGVVLGEVLHRTALAILDEGEPTV--ARSVLSLLVEPVGGINRYLFGRRKNDFLPVQGN 238
Query: 244 SVNLFY-MTTTLDCHSDVDHREF 179
+ L T+ +D ++D+D F
Sbjct: 239 FLQLMAGFTSNVDNYNDIDGTRF 261
>UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 651
Score = 32.7 bits (71), Expect = 5.3
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 108 HWTWLSPDC--CSTNFRNLSFCSARKNSLWSTSE*QSRV 218
H T L DC C N LS C R +LW+TS S++
Sbjct: 182 HLTSLQKDCFACMPNLMRLSMCETRVANLWTTSAVLSKI 220
>UniRef50_Q4DU87 Cluster: Amastin, putative; n=70; Trypanosoma
cruzi|Rep: Amastin, putative - Trypanosoma cruzi
Length = 194
Score = 32.7 bits (71), Expect = 5.3
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +2
Query: 86 MLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVEQVYAIRQVFQ 262
+L + G PLD PR + L +P + L K + G + + YA+ ++F+
Sbjct: 18 LLMLTGTPLDQFRPRTNPFFLTDPCVTLWGGKMHCSSTEYVISGNDVIHECYAVLELFR 76
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 32.7 bits (71), Expect = 5.3
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 RREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILL 166
RR P+ + VF R ++ V K G G+ + G LD +P L K L P+LL
Sbjct: 506 RRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9;
Bacteria|Rep: 30S ribosomal protein S9 - Thermotoga
maritima
Length = 134
Score = 32.7 bits (71), Expect = 5.3
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLV-----EPRLLQYKLQEPILLLGKEKFSMVDI 199
GR+KTA A Y + G G ++VNG+ + + P ++ + EP+ + D+
Sbjct: 11 GRRKTAVARVYLRPGEGKVKVNGKEYESLNDYFKNPAWTKHAI-EPLEV--TNTLGKFDL 67
Query: 200 RVTVKGGGHVEQVYAIR 250
+ V GGG Q A+R
Sbjct: 68 VIRVNGGGLSGQSGAVR 84
>UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p -
Drosophila melanogaster (Fruit fly)
Length = 395
Score = 32.3 bits (70), Expect = 7.0
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 41 KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 217
+KTA A V G G + +NG+ + E + +L P+ E VD+ V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333
Query: 218 GGHVEQVYAIR 250
GG Q AIR
Sbjct: 334 GGPSGQAGAIR 344
>UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20;
Bacteria|Rep: 30S ribosomal protein S9 - Rhodopirellula
baltica
Length = 137
Score = 32.3 bits (70), Expect = 7.0
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 208
GR+K++ A + G G + +NG+ ++ V + +Y + E + G + VD+ +
Sbjct: 17 GRRKSSVARVRVRPGSGKITINGKSIEEYFVNDQ-HRYAITETLEAAGLTE--SVDLLIR 73
Query: 209 VKGGGHVEQVYAIRQVFQR 265
V GGG Q A+R R
Sbjct: 74 VSGGGMTGQAGAVRMGLAR 92
>UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66;
Bacteria|Rep: 30S ribosomal protein S9 - Mycoplasma
pulmonis
Length = 136
Score = 32.3 bits (70), Expect = 7.0
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 20 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVD 196
A + GR+K++ A +G G +N R + ++ + +P L + + D
Sbjct: 11 AFRGLGRRKSSVARVILLKGSGKFTINKREAKEYLKSDIYIKDALQPFDLT--QTNNTFD 68
Query: 197 IRVTVKGGGHVEQVYAIR 250
IRVTV+GGG Q AIR
Sbjct: 69 IRVTVRGGGLAGQAGAIR 86
>UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
30S ribosomal protein S9 - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 101
Score = 31.9 bits (69), Expect = 9.3
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 211
GR+KT+ A G + +NG+ +D R + K+ E L L E + ++V V
Sbjct: 12 GRRKTSVARVRLIPGGQGVEINGKAMDEYFGGRAILSKIVEQPLAL-TETLNKFAVKVNV 70
Query: 212 KGGGHVEQVYAIR 250
GGG+ Q AIR
Sbjct: 71 VGGGNSGQAGAIR 83
>UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Polyketide synthase -
Stigmatella aurantiaca DW4/3-1
Length = 535
Score = 31.9 bits (69), Expect = 9.3
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 343 RSLLVADPRRCEPKKFGGPGARARY 417
RSLL P EP+ + GPGAR RY
Sbjct: 229 RSLLTEAPAPAEPEPWTGPGARVRY 253
>UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 492
Score = 31.9 bits (69), Expect = 9.3
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 38 RKKTATAVAYCKRGHGMLRV-NGRPLDLVEPRLLQYKLQEP 157
R TAT+V +RG G RV +G P V R L Y L++P
Sbjct: 229 RPATATSVGATRRGLGWFRVFSGTPTGAVAARALTYWLRDP 269
>UniRef50_A7RAF3 Cluster: Putative uncharacterized protein; n=1;
Xylaria sp. BCC 1067|Rep: Putative uncharacterized
protein - Xylaria sp. BCC 1067
Length = 375
Score = 31.9 bits (69), Expect = 9.3
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 412 WHGHLDHRTSWARSDAGQPPANSYRIELGCL*FPSLR-LRLHISG-RRRSEPLKYLSDSV 239
+HG ++ +A S PAN +ELGC S+R +L +SG R++++P+ Y + V
Sbjct: 67 FHGDIEILCKYAPSICSALPANGILLELGC---GSIRKTKLLLSGLRKQNKPIHYFALDV 123
Query: 238 NLFYMTTTL 212
+ + T L
Sbjct: 124 SRESLETNL 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,022,786
Number of Sequences: 1657284
Number of extensions: 11726289
Number of successful extensions: 31068
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 30223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31053
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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