Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40305
(526 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical pr... 127 6e-30
Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z36282-1|CAD45602.1| 424|Caenorhabditis elegans Hypothetical pr... 30 0.88
AF455271-1|AAL65193.1| 424|Caenorhabditis elegans C21ORF80 prot... 30 0.88
AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical ... 29 1.5
Z68341-1|CAA92764.1| 258|Caenorhabditis elegans Hypothetical pr... 28 4.7
L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4 ... 28 4.7
AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin pro... 28 4.7
Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical pr... 27 6.2
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 27 6.2
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 27 6.2
>Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical
protein T01C3.6 protein.
Length = 144
Score = 127 bits (306), Expect = 6e-30
Identities = 53/84 (63%), Positives = 72/84 (85%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 193
+Q+VQ FGRKKTATAVA+CK+G G+++VNGRPL+ +EP++L+ KLQEP+LL+GKE+F V
Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64
Query: 194 DIRVTVKGGGHVEQVYAIRQVFQR 265
DIR+ V GGGHV Q+YA+RQ +
Sbjct: 65 DIRIRVSGGGHVAQIYAVRQALAK 88
Score = 99 bits (238), Expect = 1e-21
Identities = 44/60 (73%), Positives = 53/60 (88%)
Frame = +1
Query: 253 SISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 432
+++KAL+A+Y KYVDE SK+E+K+I YD+SLLVADPRR E KKFGGPGARARYQKSYR
Sbjct: 85 ALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRRRESKKFGGPGARARYQKSYR 144
>Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical
protein BE10.4 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.50
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 289 YVDEASKKEIKDILVQYDRSLLVADPRRCE 378
+ DE +KE+ D+ QYDRS+ + D R E
Sbjct: 151 FCDEVQQKEVGDLFHQYDRSIEIIDKVRHE 180
>Z36282-1|CAD45602.1| 424|Caenorhabditis elegans Hypothetical
protein K10G9.3 protein.
Length = 424
Score = 30.3 bits (65), Expect = 0.88
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 217 WWSCRTSLRYPTSISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--F 390
+W R S+RY + AF +KY+D K+ D++ LV D + +P++
Sbjct: 230 YWKARRSMRYSNDLVDVADAFRKKYLDSDDKR---------DKTKLVDDWTKEKPRRTAI 280
Query: 391 GGP 399
GGP
Sbjct: 281 GGP 283
>AF455271-1|AAL65193.1| 424|Caenorhabditis elegans C21ORF80
protein.
Length = 424
Score = 30.3 bits (65), Expect = 0.88
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 217 WWSCRTSLRYPTSISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--F 390
+W R S+RY + AF +KY+D K+ D++ LV D + +P++
Sbjct: 230 YWKARRSMRYSNDLVDVADAFRKKYLDSDDKR---------DKTKLVDDWTKEKPRRTAI 280
Query: 391 GGP 399
GGP
Sbjct: 281 GGP 283
>AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical
protein Y92H12A.5 protein.
Length = 1375
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -1
Query: 283 GRRRSEPLKYLSDSVNLFYMTTTLDCHSDVDHREFFLAEQKDRFLKFVLQQ 131
G + + KYL+D+V+L T + + S +++L Q DR+ KF L +
Sbjct: 532 GNIKLDEKKYLNDAVDLMTSTRSRNATSAGFRMQYYLTRQPDRY-KFCLMR 581
>Z68341-1|CAA92764.1| 258|Caenorhabditis elegans Hypothetical
protein F01G4.2 protein.
Length = 258
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 127 QTAAVQTSGTYPFARQGKILYGRHQSDSQG 216
QT V GT+ R G L G H+ D+ G
Sbjct: 113 QTIDVNVLGTFNVIRHGVALMGEHEKDANG 142
>L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical
protein F09G8.3 protein.
Length = 392
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 349 LLVADPRRCEPKKFGGPGARARY 417
LL DPR+ E K PGARA++
Sbjct: 365 LLTLDPRKNERSKVNQPGARAKW 387
>AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4
protein.
Length = 348
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = -1
Query: 232 FYMTTTLDCHSDVDHREFFLAEQKDRFLKFVLQQSGLNQVQWTPVYTQHSMTTLAIRNCG 53
+YMTT+ + +HR + L E ++ L + S + + P Q T A
Sbjct: 147 YYMTTSTGKANGTNHRMYGLCESQNMRLSMKVSASQPHPTRRAPTRRQEDFVTTASAELM 206
Query: 52 GG 47
GG
Sbjct: 207 GG 208
>AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin
protein 4 protein.
Length = 348
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = -1
Query: 232 FYMTTTLDCHSDVDHREFFLAEQKDRFLKFVLQQSGLNQVQWTPVYTQHSMTTLAIRNCG 53
+YMTT+ + +HR + L E ++ L + S + + P Q T A
Sbjct: 147 YYMTTSTGKANGTNHRMYGLCESQNMRLSMKVSASQPHPTRRAPTRRQEDFVTTASAELM 206
Query: 52 GG 47
GG
Sbjct: 207 GG 208
>Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical protein
F16D3.4 protein.
Length = 1232
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +2
Query: 86 MLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVE 232
++ + P+D + R + ++L+ P+L LG E + + + + V GG E
Sbjct: 1004 LMNIYSEPMDFISDRTV-FQLK-PLLDLGSEYYEQLILGIVVSAGGLAE 1050
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 223 TTTLDCHSDVDHREFFLAEQKD-RF--LKFVLQQSG 125
TT LDC + H EF+ AE D RF + F+ +Q G
Sbjct: 146 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 181
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 223 TTTLDCHSDVDHREFFLAEQKD-RF--LKFVLQQSG 125
TT LDC + H EF+ AE D RF + F+ +Q G
Sbjct: 21 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,332,772
Number of Sequences: 27780
Number of extensions: 268365
Number of successful extensions: 662
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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