Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40303
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            54   5e-09
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    35   0.002
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    27   0.72 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   2.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.9  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   6.7  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   6.7  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   8.8  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 53.6 bits (123), Expect = 5e-09
 Identities = 20/50 (40%), Positives = 32/50 (64%)
 Frame = +1

Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
           K ++WDTAGQER+  S+   YYR   A ++VYD+   ++F     W++E+
Sbjct: 74  KFEIWDTAGQERYH-SLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKEL 122


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 35.1 bits (77), Expect = 0.002
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 100 QKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI-SAWMQEM 255
           Q  L LWDTAGQE + + +    Y      +I Y V  P +F ++ S W  E+
Sbjct: 53  QVSLGLWDTAGQEDYDR-LRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEI 104


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 354 ISEHKWWLVWIQEYHSHIY 298
           I EH+W ++ I  Y +H+Y
Sbjct: 187 IPEHRWRIISIYSYSNHVY 205


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 563  NYSDRNCNQLSSVLTM*PPLTDFSRHTNNSQWLFRVQFM 447
            NY+    N   S  T+ PPL+   + T NS  L  +  M
Sbjct: 1246 NYNKLKANNGLSTTTVPPPLSGTGQTTTNSNLLTSMMLM 1284


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 563  NYSDRNCNQLSSVLTM*PPLTDFSRHTNNSQWLFRVQFM 447
            NY+    N   S  T+ PPL+   + T NS  L  +  M
Sbjct: 1242 NYNKLKANNGLSTTTVPPPLSGTGQTTTNSNLLTSMMLM 1280


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +3

Query: 510 WSHCQDRGKLVAVPIRIVVYATENNIET 593
           WS C D      +  R++    EN+  T
Sbjct: 192 WSECNDAWNATCIDSRLITNMAENSTAT 219


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +3

Query: 510 WSHCQDRGKLVAVPIRIVVYATENNIET 593
           WS C D      +  R++    EN+  T
Sbjct: 192 WSECNDAWNATCIDSRLITNMAENSTAT 219


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 148 FEIFLVQQCPITGVFFASIQVYPGWR*LTFFIYISS 41
           FE F + +  + GVFF S    P W    F + + +
Sbjct: 69  FEGFCIAE--VNGVFFCSCYAPPSWELERFHVMLDN 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,106
Number of Sequences: 2352
Number of extensions: 14581
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)