Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40303
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 72 3e-13
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 72 4e-13
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 71 8e-13
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 65 4e-11
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 64 1e-10
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 62 5e-10
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 62 5e-10
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 60 1e-09
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 60 2e-09
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 60 2e-09
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 60 2e-09
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 59 2e-09
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 59 2e-09
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 59 2e-09
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 59 2e-09
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 59 2e-09
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 59 3e-09
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 59 3e-09
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 59 3e-09
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 59 3e-09
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 58 8e-09
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 56 2e-08
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 56 2e-08
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 53 2e-07
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 53 2e-07
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 53 2e-07
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 46 3e-05
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 46 3e-05
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 40 0.001
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 38 0.009
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 37 0.015
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 37 0.015
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.026
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 35 0.061
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 35 0.061
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 34 0.11
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 34 0.11
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 34 0.11
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 34 0.11
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 33 0.14
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 33 0.14
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 33 0.25
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 32 0.43
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 32 0.43
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 32 0.43
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 32 0.43
AF026204-3|AAB71253.1| 424|Caenorhabditis elegans Hypothetical ... 31 0.57
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 31 0.75
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.99
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 30 1.3
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 30 1.3
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 30 1.3
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 30 1.7
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 30 1.7
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 30 1.7
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 30 1.7
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 30 1.7
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 30 1.7
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 28 5.3
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 28 5.3
AL032637-17|CAD60427.1| 294|Caenorhabditis elegans Hypothetical... 28 5.3
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF078787-3|AAC26951.1| 335|Caenorhabditis elegans Hypothetical ... 28 7.0
Z73912-1|CAA98145.1| 465|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z14067-1|CAA78450.1| 465|Caenorhabditis elegans putative integr... 27 9.2
Z14066-1|CAA78449.1| 465|Caenorhabditis elegans putative integr... 27 9.2
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 27 9.2
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 80.2 bits (189), Expect = 1e-15
Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Frame = +3
Query: 255 ESHGLMN---APRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVE 425
E HGL+ PR+L+GNKCD +R++T AQ AD+ M LFETSA L SE D+VE
Sbjct: 200 EKHGLVGDSEVPRILIGNKCDVECT-NRVSTDEAQMFADRNNMALFETSAKLASEADHVE 258
Query: 426 SIFLTLAHKLYSKQPLRVIS 485
SIFLTL HKL +P+ V S
Sbjct: 259 SIFLTLLHKLQQSKPMHVQS 278
Score = 76.6 bits (180), Expect = 2e-14
Identities = 31/49 (63%), Positives = 43/49 (87%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQE 252
++QLWDTAGQER+R+S+V HYYRNV+AVV VYDVT E+F+ ++ W++E
Sbjct: 150 RVQLWDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKE 198
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 72.1 bits (169), Expect = 3e-13
Identities = 28/54 (51%), Positives = 41/54 (75%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEMN 258
K KLQ+WDTAGQERFR ++ YYR H +++VYD+T ETF+++ W+QE++
Sbjct: 58 KTIKLQIWDTAGQERFR-TITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEID 110
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +3
Query: 273 NAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHK 452
N ++LVGNKCD T + + T AQ A + G+P ETSA NVE FLT+A +
Sbjct: 116 NVNKLLVGNKCDL-TAKRAVETQAAQDYAGQLGIPFLETSA---KSSTNVEQAFLTMASE 171
Query: 453 LYSK 464
+ S+
Sbjct: 172 IKSR 175
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 71.7 bits (168), Expect = 4e-13
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +1
Query: 118 WDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQE 252
WDTAGQER+R+S+V HYYRNV+AVV VYDVT E+F+ ++ W++E
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKE 45
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 70.9 bits (166), Expect = 8e-13
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +1
Query: 76 SQDIPGLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
+ DI G ++ KLQ+WDTAGQERFR ++ YYR H VV+VYDVT E+F ++ W+QE+
Sbjct: 51 TMDING-QRVKLQIWDTAGQERFR-TITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEI 108
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 282 RVLVGNKCDCGTPESRLA-TTYAQRLADKYGMPLFETSALLDSECDNVESIF 434
+VLVGNKC+ E R+ + A+ A + FETSA E NVE +F
Sbjct: 117 KVLVGNKCE--ENERRVVLESDARNYAQSMNISFFETSA---KEDKNVEPMF 163
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
KLQ+WDTAGQERFR S+ Q YYR+ HA+V+VYDV+ +F + W+ E+
Sbjct: 57 KLQIWDTAGQERFR-SITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEI 105
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 63.7 bits (148), Expect = 1e-10
Identities = 25/52 (48%), Positives = 40/52 (76%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQE 252
KQ KLQ+WDTAGQE FR S+ + YYR ++VYD+T+ +TF+ +++W+++
Sbjct: 53 KQIKLQIWDTAGQESFR-SITRSYYRGAAGALLVYDITRRDTFNHLTSWLED 103
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEMN 258
+LQ+WDTAGQERFR MV Y RN A +IVYDVT TF + W+++++
Sbjct: 106 RLQVWDTAGQERFR-CMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLD 155
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 61.7 bits (143), Expect = 5e-10
Identities = 24/54 (44%), Positives = 40/54 (74%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEMN 258
K+ KLQ+WDT GQERFR ++ Q YYR+ + +V+ YD+T ++F S+ W+ +++
Sbjct: 57 KRVKLQIWDTGGQERFR-TITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVS 109
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEMN 258
KL +WDTAGQERFR ++ YYR V+ VYDVT +F ++ WMQE++
Sbjct: 34 KLAIWDTAGQERFR-TLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVD 83
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEMN 258
KL +WDTAGQERFR ++ YYR V+ VYDVT +F ++ WMQE++
Sbjct: 61 KLAIWDTAGQERFR-TLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVD 110
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 60.9 bits (141), Expect = 8e-10
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +1
Query: 88 PGLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQE 252
PG + K LQLWDTAGQE+FR S+ + YYRN V+ +YD T E+F + W++E
Sbjct: 63 PGYRVK-LQLWDTAGQEKFR-SITKSYYRNSVGVLAIYDTTNRESFEHVENWVKE 115
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
+LQLWDTAGQERFR S++ Y R+ V+VYD+T +FH S W+ ++
Sbjct: 60 RLQLWDTAGQERFR-SLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDV 108
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/49 (46%), Positives = 37/49 (75%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQE 252
KLQ+WDTAGQERFR ++ + YYR ++VYD+T+ T++ +S+W+ +
Sbjct: 61 KLQIWDTAGQERFR-AVTRSYYRGAAGALMVYDITRRSTYNHLSSWLAD 108
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
+LQLWDTAGQERFR S++ Y R+ V+VYD+T +FH + W+ ++
Sbjct: 61 RLQLWDTAGQERFR-SLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDV 109
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
K+ KLQ+WDTAGQERFR ++ YYR +++VYD+T +F +I W++ +
Sbjct: 55 KKIKLQIWDTAGQERFR-TITTAYYRGAMGIILVYDITNERSFENIKNWIRNI 106
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
K+ KLQ+WDTAGQERFR ++ YYR +++VYD+T +F +I W++ +
Sbjct: 55 KKIKLQIWDTAGQERFR-TITTAYYRGAMGIILVYDITNERSFENIKNWIRNI 106
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +3
Query: 255 ESHGLMNAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIF 434
E H + R+++GNKCD ++ ++LA +YG ETSA + N++ F
Sbjct: 107 EEHAASDVERMIIGNKCDI-EERREVSRDRGEQLAIEYGTKFLETSAKANL---NIDEAF 162
Query: 435 LTLAHKLYSKQPLRVISVAGEVS 503
TLA + SK + G VS
Sbjct: 163 FTLARDIKSKMEQNEMRAGGSVS 185
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
K+ KLQ+WDTAGQERFR ++ YYR +++VYD+T +F +I W++ +
Sbjct: 55 KKIKLQIWDTAGQERFR-TITTAYYRGAMGIILVYDITNERSFENIKNWIRNI 106
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +3
Query: 255 ESHGLMNAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIF 434
E H + R+++GNKCD ++ ++LA +YG ETSA + N++ F
Sbjct: 107 EEHAASDVERMIIGNKCDI-EERREVSRDRGEQLAIEYGTKFLETSAKANL---NIDEAF 162
Query: 435 LTLAHKLYSKQPLRVISVAGEVS 503
TLA + SK + G VS
Sbjct: 163 FTLARDIKSKMEQNEMRAGGSVS 185
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +1
Query: 91 GLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
G K+ KLQ+WDTAGQER+R ++ YYR +++YD+T E+F+S+ W ++
Sbjct: 67 GDKRVKLQIWDTAGQERYR-TITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +3
Query: 273 NAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHK 452
NA VLVGNKCD + E ++ ++LAD+ G+ FETSA E NV+++F L
Sbjct: 127 NAQVVLVGNKCDMDS-ERVVSMDRGRQLADQLGLEFFETSA---KENINVKAVFEKLVEI 182
Query: 453 LYSK 464
+ K
Sbjct: 183 ICDK 186
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +1
Query: 91 GLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
G K+ KLQ+WDTAGQER+R ++ YYR +++YD+T E+F+S+ W ++
Sbjct: 67 GDKRVKLQIWDTAGQERYR-TITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +3
Query: 273 NAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHK 452
NA VLVGNKCD + E ++ ++LAD+ G+ FETSA E NV+++F L
Sbjct: 127 NAQVVLVGNKCDMDS-ERVVSMDRGRQLADQLGLEFFETSA---KENINVKAVFEKLVEI 182
Query: 453 LYSK 464
+ K
Sbjct: 183 ICDK 186
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +1
Query: 91 GLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
G K+ KLQ+WDTAGQER+R ++ YYR +++YD+T E+F+S+ W ++
Sbjct: 67 GDKRVKLQIWDTAGQERYR-TITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +3
Query: 273 NAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHK 452
NA VLVGNKCD + E ++ ++LAD+ G+ FETSA E NV+++F L
Sbjct: 127 NAQVVLVGNKCDMDS-ERVVSMDRGRQLADQLGLEFFETSA---KENINVKAVFEKLVEI 182
Query: 453 LYSK 464
+ K
Sbjct: 183 ICDK 186
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +1
Query: 91 GLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
G K+ KLQ+WDTAGQER+R ++ YYR +++YD+T E+F+S+ W ++
Sbjct: 81 GDKRVKLQIWDTAGQERYR-TITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 134
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +3
Query: 273 NAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHK 452
NA VLVGNKCD + E ++ ++LAD+ G+ FETSA E NV+++F L
Sbjct: 141 NAQVVLVGNKCDMDS-ERVVSMDRGRQLADQLGLEFFETSA---KENINVKAVFEKLVEI 196
Query: 453 LYSK 464
+ K
Sbjct: 197 ICDK 200
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +1
Query: 91 GLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
G K+ KLQ+WDTAGQER+R ++ YYR +++YD+T E+F+S+ W ++
Sbjct: 67 GDKRVKLQIWDTAGQERYR-TITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +3
Query: 273 NAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHK 452
NA VLVGNKCD + E ++ ++LAD+ G+ FETSA E NV+++F L
Sbjct: 127 NAQVVLVGNKCDMDS-ERVVSMDRGRQLADQLGLEFFETSA---KENINVKAVFEKLVEI 182
Query: 453 LYSK 464
+ K
Sbjct: 183 ICDK 186
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
K+ KL +WDT GQERFR S+V YYR+ ++VYD+T E+F+ + W+ ++
Sbjct: 53 KKVKLHVWDTCGQERFR-SLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDL 104
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 58.8 bits (136), Expect = 3e-09
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEMN 258
K+ KLQ+WDTAGQERF ++ YYR +++VYD+T ++F +I+ W++ ++
Sbjct: 56 KKIKLQIWDTAGQERFH-TITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNID 108
Score = 35.1 bits (77), Expect = 0.046
Identities = 19/72 (26%), Positives = 39/72 (54%)
Frame = +3
Query: 255 ESHGLMNAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIF 434
+ H + ++++GNKCD + ++ +++A +G+ ETSA L+ +V++ F
Sbjct: 108 DEHASEDVVKMILGNKCDM-SDRRVVSRERGEKIAQDHGISFHETSAKLNV---HVDTAF 163
Query: 435 LTLAHKLYSKQP 470
LA + +K P
Sbjct: 164 YDLAEAILAKMP 175
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 58.8 bits (136), Expect = 3e-09
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEMN 258
K+ KLQ+WDTAGQERF ++ YYR +++VYD+T ++F +I+ W++ ++
Sbjct: 56 KKIKLQIWDTAGQERFH-TITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNID 108
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +1
Query: 91 GLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
G K+ KLQ+WDTAGQERFR S+ YYR+ A+++VYD+ +F + W+ ++
Sbjct: 48 GDKKVKLQIWDTAGQERFR-SVTTSYYRDADALLLVYDIANRASFENCRNWLSQI 101
Score = 36.3 bits (80), Expect = 0.020
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +3
Query: 288 LVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHKL 455
LVGNKCD P + + T +RLA+ Y +P ETSA NV+ FL LA ++
Sbjct: 113 LVGNKCDL--PRA-VPTDEGKRLAEAYQIPFMETSAKTGF---NVDRAFLGLAERM 162
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +1
Query: 91 GLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
G K+ KLQ+WDTAGQERFR S+ YYR+ A+++VYD+ +F + W+ ++
Sbjct: 48 GDKKVKLQIWDTAGQERFR-SVTTSYYRDADALLLVYDIANRASFENCRNWLSQI 101
Score = 36.3 bits (80), Expect = 0.020
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +3
Query: 288 LVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHKL 455
LVGNKCD P + + T +RLA+ Y +P ETSA NV+ FL LA ++
Sbjct: 113 LVGNKCDL--PRA-VPTDEGKRLAEAYQIPFMETSAKTGF---NVDRAFLGLAERM 162
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 25 TINM*NLKYK*KMSVNASQDIPGLKQK--KLQLWDTAGQERFRKSMVQHYYRNVHAVVIV 198
T N NLK K + V + I ++ K K+Q+WDTAG ERFR YYR ++V
Sbjct: 29 TRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERFRCG-ASSYYRGALGALLV 87
Query: 199 YDVTKPETFHSISAWMQ 249
YD++K +T+ S+ W++
Sbjct: 88 YDISKHKTYESVEQWLK 104
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
K ++WDTAGQER+ S+ YYR A ++VYD+T E+F W++E+
Sbjct: 69 KFEIWDTAGQERYH-SLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKEL 117
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
K K Q+WDTAGQER+R ++ YYR ++VYD+ K T+ ++ W++E+
Sbjct: 58 KTVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDIAKHVTYENVERWLKEL 109
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +1
Query: 85 IPGLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
IP + +QLWDTAGQERFR S+ + Y+R VV+++DVT ++F ++ W+ +
Sbjct: 246 IPPNRAIAMQLWDTAGQERFR-SITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSV 301
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 288 LVGNKCDCGTPESRLATTY--AQRLADKYGMPLFETSA 395
LVGNK D + + Y A++LA ++ +P FETSA
Sbjct: 313 LVGNKMDLFGSDIARSAVYRAAEKLAVEFKIPFFETSA 350
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
K K Q+WDTAGQER+R ++ YYR ++VYD+ K T+ ++ W++E+
Sbjct: 58 KTVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDIAKHVTYENVERWLKEL 109
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQ 249
LQLWDTAGQERFR S+ + Y+R ++VYDV ++F + W++
Sbjct: 512 LQLWDTAGQERFR-SLCKSYFRRADGAILVYDVCAEQSFLRVRDWIE 557
Score = 32.3 bits (70), Expect = 0.32
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 279 PRVLVGNKCDC--GTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHK 452
P +LVGNK D TP S +A T +A G+ ETSAL S N+++ L L +
Sbjct: 568 PIILVGNKVDMRISTPGS-VAKTDGASMAAAMGVLFMETSALDGS---NIDNAMLALTRE 623
Query: 453 LYSKQPLRVIS 485
L + + + + S
Sbjct: 624 LMAVEDVEIRS 634
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/49 (40%), Positives = 35/49 (71%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
LQLWDTAGQERFR S+ ++R+ ++++D+T ++F +I W+ ++
Sbjct: 67 LQLWDTAGQERFR-SLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQL 114
Score = 37.5 bits (83), Expect = 0.009
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Frame = +3
Query: 261 HGLMNAPRVLV-GNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFL 437
H P +++ GNK D +++T A++LAD+ G+P FETSA + + L
Sbjct: 117 HAYCEQPDIIICGNKADLEN-RRQVSTARAKQLADQLGLPYFETSACTSTNVEKSVDCLL 175
Query: 438 TLAHKLY------SKQPL---RVISVAGEVSKGWSHC 521
L + S PL R +S+ G+ S S+C
Sbjct: 176 DLVMQRIQQSVETSSLPLSECRGVSLDGDPSAASSYC 212
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/49 (40%), Positives = 35/49 (71%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
LQLWDTAGQERFR S+ ++R+ ++++D+T ++F +I W+ ++
Sbjct: 67 LQLWDTAGQERFR-SLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQL 114
Score = 37.5 bits (83), Expect = 0.009
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Frame = +3
Query: 261 HGLMNAPRVLV-GNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFL 437
H P +++ GNK D +++T A++LAD+ G+P FETSA + + L
Sbjct: 117 HAYCEQPDIIICGNKADLEN-RRQVSTARAKQLADQLGLPYFETSACTSTNVEKSVDCLL 175
Query: 438 TLAHKLY------SKQPL---RVISVAGEVSKGWSHC 521
L + S PL R +S+ G+ S S+C
Sbjct: 176 DLVMQRIQQSVETSSLPLSECRGVSLDGDPSAASSYC 212
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/50 (40%), Positives = 35/50 (70%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
+L++WDT GQE FR S+++ YYRN ++VYD+T ++F + W+ ++
Sbjct: 56 RLRVWDTCGQENFR-SIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDL 104
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = +3
Query: 261 HGLMNAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLT 440
HG +L+GNK D + T + A K G+ ETSA + +VE F+
Sbjct: 107 HGHPEMVIMLIGNKSDLKAVRD-VTTEEGEAFAKKNGLTFMETSAKANK---HVEKAFVN 162
Query: 441 LAHKLYSKQPLRVI 482
AH++Y K L VI
Sbjct: 163 TAHEIYKKLKLGVI 176
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 91 GLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISA-WMQEM 255
G + +L+LWDTAG ER+R ++ YY + H V+ VYD+T ++F ++ W++E+
Sbjct: 51 GRDKIRLELWDTAGMERYR-TIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEI 105
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQE 252
LQ+WDTAGQERF +S+ +YR V+ +DVT +F S+ +W E
Sbjct: 60 LQIWDTAGQERF-QSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDE 106
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/52 (36%), Positives = 34/52 (65%)
Frame = +1
Query: 100 QKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
Q L +WDTAGQE++ ++ YYR + V++V+D+T ++F + W+ E+
Sbjct: 60 QADLHIWDTAGQEKYH-ALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEI 110
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEMNPMV 267
LQ+WD +GQ+R+ M + YY++ HA +IV D T+ T W +++ V
Sbjct: 63 LQIWDISGQDRYGV-MTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKV 114
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEMNPMV 267
LQ+WD +GQ+R+ M + YY++ HA +IV D T+ T W +++ V
Sbjct: 63 LQIWDISGQDRYGV-MTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKV 114
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAW 243
+LQLWDTAGQERFR+ + Y R+ ++V D++ + W
Sbjct: 57 RLQLWDTAGQERFRQ-LAPAYIRSARVALLVIDLSDENCVEHLIRW 101
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 100 QKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
Q + +WDTAGQE+F + YY +I++DVT T+ ++ W +++
Sbjct: 57 QIRFNVWDTAGQEKF-GGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDL 107
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI 234
L++ DTAG E+F SM Y +N V+VY +T +TFH I
Sbjct: 53 LEILDTAGTEQF-SSMRDLYIKNGQGFVVVYSITSQQTFHDI 93
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 264 GLMNAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSA 395
G N P +LVGNKCD + + ++ + LA+ + P E SA
Sbjct: 105 GSENVPILLVGNKCDL-SHQRQVRSEEGLALAESWSCPFTECSA 147
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 85 IPGLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWM 246
+P Q +Q+WD GQ M+ Y + V +VYDVT ++F + W+
Sbjct: 79 LPHEMQVLVQVWDIGGQS-IAGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWL 131
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPE 219
++LWD GQ RFR SM + Y R V+A+V + D E
Sbjct: 67 IKLWDIGGQPRFR-SMWERYCRGVNAIVFMVDAADEE 102
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPE 219
++LWD GQ RFR SM + Y R V+A+V + D E
Sbjct: 67 IKLWDIGGQPRFR-SMWERYCRGVNAIVFMVDAADEE 102
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.026
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +3
Query: 279 PRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHKLY 458
P +LVGNKCD E + Q LA ++G ETSA NV +F L ++
Sbjct: 110 PMILVGNKCDL-EDERVVGKDQGQNLARQFGSAFLETSAKAKI---NVSEVFYDLVRQIN 165
Query: 459 SKQP 470
+ P
Sbjct: 166 RRYP 169
Score = 34.3 bits (75), Expect = 0.081
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI 234
+Q L++ DTAG E+F +M Y +N V+VY +T TF+ +
Sbjct: 49 QQCMLEILDTAGTEQFT-AMRDLYMKNGQGFVLVYSITAQSTFNDL 93
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI 234
+L++ DTAG E+F M + YYR V+V+ + + TF ++
Sbjct: 52 RLEILDTAGTEQF-TGMRETYYRTAQGFVLVFSLAETSTFENL 93
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +3
Query: 279 PRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIF 434
P +LVGNK D ++ + A A+K +P FETSA L+ NV +F
Sbjct: 109 PMILVGNKSDLAETR-QVDESEAHNFAEKLKIPYFETSARLN---QNVSEVF 156
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
L WD GQE R+ + YY + +A++ V D T+ + F +++ +E+
Sbjct: 71 LHFWDLGGQESLRE-LWATYYDDANAMIFVVDATRSDLFPIVASQFKEV 118
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI 234
KL++ DTAGQE F +M + Y R +IV+ VT +F +
Sbjct: 66 KLEILDTAGQEEF-STMREQYLRTGSGFLIVFAVTDRNSFEEV 107
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI 234
KL++ DTAGQE F +M + Y R +IV+ VT +F +
Sbjct: 66 KLEILDTAGQEEF-STMREQYLRTGSGFLIVFAVTDRNSFEEV 107
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI 234
KL++ DTAGQE F +M + Y R +IV+ VT +F +
Sbjct: 66 KLEILDTAGQEEF-STMREQYLRTGSGFLIVFAVTDRNSFEEV 107
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 106 KLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI 234
KL++ DTAGQE F +M + Y R +IV+ VT +F +
Sbjct: 66 KLEILDTAGQEEF-STMREQYLRTGSGFLIVFAVTDRNSFEEV 107
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI-SAWMQEM 255
KQ +L LWDTAGQE + + + Y + +++ + + P++ +I W E+
Sbjct: 51 KQVELALWDTAGQEDYDR-LRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV 103
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI-SAWMQEM 255
KQ +L LWDTAGQE + + + Y + +++ + + P++ +I W E+
Sbjct: 51 KQVELALWDTAGQEDYDR-LRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV 103
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYD 204
K K +WD GQ++ R + +HYY A++ V D
Sbjct: 55 KNIKFNVWDVGGQDKIR-PLWRHYYTGTQALIFVMD 89
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI-SAWMQEM 255
L LWDTAGQE + + + Y ++ + V P +F ++ S W+ E+
Sbjct: 57 LGLWDTAGQEDYDR-LRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEI 105
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 31.9 bits (69), Expect = 0.43
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSIS-AWMQEM 255
K +LQL DTAGQ F ++ Y + VIVY V ++F +S W E+
Sbjct: 55 KPIRLQLHDTAGQSSF-DTLRPLCYTDADVFVIVYSVVDLQSFEDVSHHWYPEV 107
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 31.9 bits (69), Expect = 0.43
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +3
Query: 273 NAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHK 452
+ P VLVGNKCD + T A YG+P +TSA V+ F TL +
Sbjct: 108 DVPMVLVGNKCDLSSRSVDFRT--VSETAKGYGIPNVDTSAKTRM---GVDEAFYTLVRE 162
Query: 453 L 455
+
Sbjct: 163 I 163
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI-SAWMQEM 255
L LWDTAGQE + + + Y ++ + V P +F ++ S W+ E+
Sbjct: 57 LGLWDTAGQEDYDR-LRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEI 105
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 31.9 bits (69), Expect = 0.43
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +3
Query: 273 NAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFETSALLDSECDNVESIFLTLAHK 452
+ P VLVGNKCD + T A YG+P +TSA V+ F TL +
Sbjct: 111 DVPMVLVGNKCDLSSRSVDFRT--VSETAKGYGIPNVDTSAKTRM---GVDEAFYTLVRE 165
Query: 453 L 455
+
Sbjct: 166 I 166
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +1
Query: 88 PGLKQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWM 246
P + + L+LWD G R++ Q ++ ++V+D+T + +++ W+
Sbjct: 61 PEQRTELLELWDIGGMVAHRQA-AQVFFEGAVGAILVHDLTNKRSEENLATWL 112
>AF026204-3|AAB71253.1| 424|Caenorhabditis elegans Hypothetical
protein C30E1.8 protein.
Length = 424
Score = 31.5 bits (68), Expect = 0.57
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 255 ESHGLMNAPRVLVGNKCDCGTPESRLATTYAQRLADKYGMPLFE----TSALLDSECDNV 422
E + L+ RV VGN+ + G P S LA TY Q + +FE + L D+E N+
Sbjct: 30 EDYELLEQIRVFVGNEYENGIPLSTLAFTY-QSPSQLIPFAVFEKAYINTTLGDNELKNL 88
Query: 423 ESI-FLTLAHK 452
+ ++T +H+
Sbjct: 89 SGVMYITSSHQ 99
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 354 LADKYGMPLFETSALLDSECDNVESIFLTLAHKLYSKQPLRVISVAGEVSKGWSHCQD 527
LADKYG S+LL V S +T + Y + L ISV+G ++ GW++ +
Sbjct: 136 LADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILIGISVSGTLTVGWTYATE 193
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETF 225
K +L WD G + R + +HYY N A+ V D E F
Sbjct: 414 KNYRLNFWDVGGLPKLRH-LWKHYYSNAQAIFYVIDGYAVERF 455
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.99
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 109 LQLWDTAGQERFRK----SMVQHYYRNVHAVVIVYDVTKPE 219
L LWD GQE F + S ++NV ++ V+DV E
Sbjct: 55 LHLWDCGGQESFMENFLVSQKDQIFKNVQVLIYVFDVESRE 95
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 97 KQKKLQLWDTAGQE 138
KQ KLQ+WDTAGQE
Sbjct: 53 KQIKLQMWDTAGQE 66
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETF-HSISA 240
L ++D G + R + +YY VH ++ V D + ETF SI A
Sbjct: 71 LTIYDVGGDKGIR-GIWSNYYAEVHGIIYVIDYSTDETFTESIEA 114
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETF-HSISA 240
L ++D G + R + +YY VH ++ V D + ETF SI A
Sbjct: 71 LTIYDVGGDKGIR-GIWSNYYAEVHGIIYVIDYSTDETFTESIEA 114
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISA-WMQEMN 258
L LWDTAGQE + + + Y ++ + + P +F ++ A W E++
Sbjct: 53 LGLWDTAGQEDYDR-LRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVS 102
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISA-WMQEMN 258
L LWDTAGQE + + + Y ++ + + P +F ++ A W E++
Sbjct: 53 LGLWDTAGQEDYDR-LRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVS 102
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISA-WMQEMN 258
L LWDTAGQE + + + Y ++ + + P +F ++ A W E++
Sbjct: 53 LGLWDTAGQEDYDR-LRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVS 102
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISA-WMQEMN 258
L LWDTAGQE + + + Y ++ + + P +F ++ A W E++
Sbjct: 53 LGLWDTAGQEDYDR-LRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVS 102
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISA-WMQEMN 258
L LWDTAGQE + + + Y ++ + + P +F ++ A W E++
Sbjct: 53 LGLWDTAGQEDYDR-LRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVS 102
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
+ + DTAGQE + ++ +YYR+ + V+ + E+F + + + +++
Sbjct: 67 IDILDTAGQEDY-SAIRDNYYRSGEGFICVFSILDMESFEATNEFREQI 114
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 115 LWDTAGQERFRKSMVQHYYRNVHAVVIVYD 204
+WD GQE RKS YY V++V D
Sbjct: 65 IWDIGGQESLRKSW-STYYVQTDVVIVVID 93
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 97 KQKKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSISAWMQEM 255
K +L LWD GQ+ R S ++Y+ + A++ V D + E S ++++
Sbjct: 58 KDFQLNLWDVGGQKSLR-SYWKNYFESTDALIWVVDSSDRERLLQCSEELKKL 109
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHY-YRNVHAVVIVYDVTKPETFHSISA-WMQEMN 258
L LWDTAGQ+ + +H + ++ + + P +F ++ A W E++
Sbjct: 53 LSLWDTAGQDDY--DQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVS 102
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHY-YRNVHAVVIVYDVTKPETFHSISA-WMQEMN 258
L LWDTAGQ+ + +H + ++ + + P +F ++ A W E++
Sbjct: 53 LSLWDTAGQDDY--DQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVS 102
>AL032637-17|CAD60427.1| 294|Caenorhabditis elegans Hypothetical
protein Y43F8C.19 protein.
Length = 294
Score = 28.3 bits (60), Expect = 5.3
Identities = 7/24 (29%), Positives = 20/24 (83%)
Frame = -3
Query: 363 YQLISEHKWWLVWIQEYHSHIYCP 292
Y +++ +++ ++++Q+YH+HI+ P
Sbjct: 106 YTVVAVNRFTIIFMQKYHNHIWTP 129
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 629 LCLDHNRPTILSCFNV-IFSCIDNYSDRNCNQLSSVLTM 516
LC DHN P IL C +V CI ++ R + S +++
Sbjct: 126 LCKDHNEPYILYCSDVRKLVCIQCFNGRPLEERHSFISI 164
>AF078787-3|AAC26951.1| 335|Caenorhabditis elegans Hypothetical
protein T17A3.4 protein.
Length = 335
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 79 QDIPGLKQKKLQLW-DTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSI 234
Q++ K +KL + D R+++++ Y R + + Y KP+ FH I
Sbjct: 149 QELKDFKIRKLCISSDRIQNSELRRNLLEKYSRQFRELALDYHSLKPQEFHLI 201
>Z73912-1|CAA98145.1| 465|Caenorhabditis elegans Hypothetical
protein ZK524.1 protein.
Length = 465
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/32 (31%), Positives = 23/32 (71%)
Frame = -2
Query: 175 FYSSAAPLIFEIFLVQQCPITGVFFASIQVYP 80
F+S+++ ++ +IF+V C + VF+ ++V+P
Sbjct: 156 FFSNSSLILHQIFVVTNCSLISVFY--LRVFP 185
>Z14067-1|CAA78450.1| 465|Caenorhabditis elegans putative integral
membrane protein protein.
Length = 465
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/32 (31%), Positives = 23/32 (71%)
Frame = -2
Query: 175 FYSSAAPLIFEIFLVQQCPITGVFFASIQVYP 80
F+S+++ ++ +IF+V C + VF+ ++V+P
Sbjct: 156 FFSNSSLILHQIFVVTNCSLISVFY--LRVFP 185
>Z14066-1|CAA78449.1| 465|Caenorhabditis elegans putative integral
membrane protein protein.
Length = 465
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/32 (31%), Positives = 23/32 (71%)
Frame = -2
Query: 175 FYSSAAPLIFEIFLVQQCPITGVFFASIQVYP 80
F+S+++ ++ +IF+V C + VF+ ++V+P
Sbjct: 156 FFSNSSLILHQIFVVTNCSLISVFY--LRVFP 185
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 109 LQLWDTAGQERFRKSMVQHYYRNVHAVVIVYD 204
L +WD GQ++ R ++ ++Y+ N +V V D
Sbjct: 63 LTVWDVGGQKKIR-ALWKYYFPNTTTLVFVVD 93
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 234 ISLDARDESHGLMNAPRVLVGNKCDCGTPESRLATTYAQRLAD-KYGMPLFETSALLDSE 410
++L+ + G N P ++ GNK D R T R A G FE S LD +
Sbjct: 325 VALEMIRDRPGTRNLPTLVAGNKID--LERKRTVTKQEVRAAKAAMGFEHFEISVALDHD 382
Query: 411 CDNV 422
D++
Sbjct: 383 VDDL 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,562,726
Number of Sequences: 27780
Number of extensions: 321168
Number of successful extensions: 951
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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