Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40299
         (484 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   100   3e-23
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   5.5  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    22   9.6  
AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive ...    22   9.6  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  100 bits (239), Expect = 3e-23
 Identities = 44/56 (78%), Positives = 50/56 (89%)
 Frame = +2

Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLK 421
           RRDYL ++ KY+ FEKR+RNM +HLSPCFRDVE  DIVT+GECRPLSKTVRFNVLK
Sbjct: 82  RRDYLQFIRKYDTFEKRNRNMRLHLSPCFRDVEAGDIVTLGECRPLSKTVRFNVLK 137



 Score = 87.8 bits (208), Expect = 2e-19
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 81  RKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQK 227
           +K LR H  +GLGFKTP+EAI GTYIDKKCPFTG++SIRGRILTGVV+K
Sbjct: 26  KKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRILTGVVRK 74



 Score = 22.2 bits (45), Expect = 9.6
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +1

Query: 1  ADQTE-RSFQKQPTVFLNRK 57
          ADQ   R+FQKQ  + LNRK
Sbjct: 2  ADQQNIRAFQKQLGINLNRK 21


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 212  GEDAAADRNVASEGTLLVNVGT 147
            GED   D+   S+GTLL  +GT
Sbjct: 1268 GEDDTGDKKTDSDGTLL-EIGT 1288


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 134  TGSLETEAHILVVSQRFS 81
            TGS+E+ AH+L    RF+
Sbjct: 951  TGSVESVAHVLFYCPRFA 968


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 10/23 (43%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = -3

Query: 179 SEGTLL-VNVGTLNRLTGSLETE 114
           ++G +L +++GTL++L GSL  E
Sbjct: 303 AQGDVLELDIGTLDQLAGSLADE 325


>AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR9 protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 83  KTVEIPQGCGPRFQD 127
           KTV +PQ CG R  D
Sbjct: 43  KTVSVPQKCGLRNVD 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,627
Number of Sequences: 2352
Number of extensions: 8858
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)