Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40299
(484 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 115 1e-25
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 115 1e-25
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 115 1e-25
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 115 1e-25
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 115 1e-25
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 115 1e-25
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 115 1e-25
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 115 1e-25
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 115 1e-25
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 115 1e-25
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 115 bits (276), Expect = 1e-25
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +2
Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+ DIVT+GECRPLSKTVRFNVLKV
Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 107 bits (256), Expect = 3e-23
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = +3
Query: 93 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
RY+K++GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVI
Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVI 88
Score = 33.5 bits (73), Expect = 0.40
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +1
Query: 7 QTERSFQKQPTVFLNRKK 60
QTER++QKQPT+F N+K+
Sbjct: 5 QTERAYQKQPTIFQNKKR 22
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 115 bits (276), Expect = 1e-25
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +2
Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+ DIVT+GECRPLSKTVRFNVLKV
Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 107 bits (256), Expect = 3e-23
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = +3
Query: 93 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
RY+K++GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVI
Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVI 88
Score = 33.5 bits (73), Expect = 0.40
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +1
Query: 7 QTERSFQKQPTVFLNRKK 60
QTER++QKQPT+F N+K+
Sbjct: 5 QTERAYQKQPTIFQNKKR 22
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 115 bits (276), Expect = 1e-25
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +2
Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+ DIVT+GECRPLSKTVRFNVLKV
Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 107 bits (256), Expect = 3e-23
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = +3
Query: 93 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
RY+K++GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVI
Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVI 88
Score = 33.5 bits (73), Expect = 0.40
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +1
Query: 7 QTERSFQKQPTVFLNRKK 60
QTER++QKQPT+F N+K+
Sbjct: 5 QTERAYQKQPTIFQNKKR 22
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 115 bits (276), Expect = 1e-25
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +2
Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+ DIVT+GECRPLSKTVRFNVLKV
Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 107 bits (256), Expect = 3e-23
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = +3
Query: 93 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
RY+K++GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVI
Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVI 88
Score = 33.5 bits (73), Expect = 0.40
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +1
Query: 7 QTERSFQKQPTVFLNRKK 60
QTER++QKQPT+F N+K+
Sbjct: 5 QTERAYQKQPTIFQNKKR 22
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 115 bits (276), Expect = 1e-25
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +2
Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+ DIVT+GECRPLSKTVRFNVLKV
Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 107 bits (256), Expect = 3e-23
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = +3
Query: 93 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
RY+K++GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVI
Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVI 88
Score = 33.5 bits (73), Expect = 0.40
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +1
Query: 7 QTERSFQKQPTVFLNRKK 60
QTER++QKQPT+F N+K+
Sbjct: 5 QTERAYQKQPTIFQNKKR 22
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 115 bits (276), Expect = 1e-25
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +2
Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+ DIVT+GECRPLSKTVRFNVLKV
Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 107 bits (256), Expect = 3e-23
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = +3
Query: 93 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
RY+K++GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVI
Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVI 88
Score = 33.5 bits (73), Expect = 0.40
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +1
Query: 7 QTERSFQKQPTVFLNRKK 60
QTER++QKQPT+F N+K+
Sbjct: 5 QTERAYQKQPTIFQNKKR 22
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 115 bits (276), Expect = 1e-25
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +2
Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+ DIVT+GECRPLSKTVRFNVLKV
Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 107 bits (256), Expect = 3e-23
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = +3
Query: 93 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
RY+K++GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVI
Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVI 88
Score = 33.5 bits (73), Expect = 0.40
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +1
Query: 7 QTERSFQKQPTVFLNRKK 60
QTER++QKQPT+F N+K+
Sbjct: 5 QTERAYQKQPTIFQNKKR 22
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 115 bits (276), Expect = 1e-25
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +2
Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+ DIVT+GECRPLSKTVRFNVLKV
Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 107 bits (256), Expect = 3e-23
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = +3
Query: 93 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
RY+K++GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVI
Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVI 88
Score = 33.5 bits (73), Expect = 0.40
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +1
Query: 7 QTERSFQKQPTVFLNRKK 60
QTER++QKQPT+F N+K+
Sbjct: 5 QTERAYQKQPTIFQNKKR 22
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 115 bits (276), Expect = 1e-25
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +2
Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+ DIVT+GECRPLSKTVRFNVLKV
Sbjct: 89 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
Score = 107 bits (256), Expect = 3e-23
Identities = 48/54 (88%), Positives = 53/54 (98%)
Frame = +3
Query: 93 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
RY+K++GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVI
Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVI 88
Score = 33.5 bits (73), Expect = 0.40
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +1
Query: 7 QTERSFQKQPTVFLNRKK 60
QTER++QKQPT+F N+K+
Sbjct: 5 QTERAYQKQPTIFQNKKR 22
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 115 bits (276), Expect = 1e-25
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +2
Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
RRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+ DIVT+GECRPLSKTVRFNVLKV
Sbjct: 14 RRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,892,856
Number of Sequences: 237096
Number of extensions: 1190219
Number of successful extensions: 2342
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2342
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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