Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40299
         (484 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   107   6e-24
AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   107   6e-24
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   107   6e-24
AE014134-2617|AAF53476.2| 1120|Drosophila melanogaster CG4587-PA...    28   5.8  

>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  107 bits (258), Expect = 6e-24
 Identities = 49/57 (85%), Positives = 52/57 (91%)
 Frame = +2

Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
           RRDYLH++ KY+RFEKRHRNMSVH SP FRDVE  DIVTIGECRPLSKTVRFNVLKV
Sbjct: 85  RRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 141



 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 41/58 (70%), Positives = 51/58 (87%)
 Frame = +3

Query: 81  RKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
           +K  R+++ +GLGF+ P EAI+GTYIDKKCP+TG+V IRGRILTGVV+K KMQRTIVI
Sbjct: 27  KKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVI 84


>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  107 bits (258), Expect = 6e-24
 Identities = 49/57 (85%), Positives = 52/57 (91%)
 Frame = +2

Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
           RRDYLH++ KY+RFEKRHRNMSVH SP FRDVE  DIVTIGECRPLSKTVRFNVLKV
Sbjct: 86  RRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142



 Score =  100 bits (240), Expect = 9e-22
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = +3

Query: 81  RKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
           +K LR  +DVGLGFKTPREAI+GTYIDKKCP+TG+V IRGRILTGVV+K KMQRTIVI
Sbjct: 28  KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVI 85



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +1

Query: 1  ADQTERSFQKQPTVFLNRKKGIGVKR 78
          ADQ ER+FQKQ  V LNRK   G+ +
Sbjct: 2  ADQNERAFQKQFGVNLNRKVKPGITK 27


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  107 bits (258), Expect = 6e-24
 Identities = 49/57 (85%), Positives = 52/57 (91%)
 Frame = +2

Query: 254 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEXCDIVTIGECRPLSKTVRFNVLKV 424
           RRDYLH++ KY+RFEKRHRNMSVH SP FRDVE  DIVTIGECRPLSKTVRFNVLKV
Sbjct: 86  RRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142



 Score =  100 bits (240), Expect = 9e-22
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = +3

Query: 81  RKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 254
           +K LR  +DVGLGFKTPREAI+GTYIDKKCP+TG+V IRGRILTGVV+K KMQRTIVI
Sbjct: 28  KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVI 85



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +1

Query: 1  ADQTERSFQKQPTVFLNRKKGIGVKR 78
          ADQ ER+FQKQ  V LNRK   G+ +
Sbjct: 2  ADQNERAFQKQFGVNLNRKVKPGITK 27


>AE014134-2617|AAF53476.2| 1120|Drosophila melanogaster CG4587-PA
           protein.
          Length = 1120

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 148 PSIASRGVLKPRPTSLWYLNGFLSASHQYLS 56
           P  A+ G+LKP     W+ N  L+ S  +LS
Sbjct: 865 PYTAAGGILKPNRLGSWFFNHLLALSAAWLS 895


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,861,117
Number of Sequences: 53049
Number of extensions: 393889
Number of successful extensions: 1053
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)