Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40298
(724 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 89 1e-16
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 67 5e-10
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 48 2e-04
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 42 0.012
UniRef50_Q8IR42 Cluster: CG33968-PA; n=5; Diptera|Rep: CG33968-P... 37 0.58
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 34 3.1
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 34 3.1
UniRef50_A1DNP8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 34 3.1
UniRef50_A5E4P2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_UPI000045D621 Cluster: COG0477: Permeases of the major ... 33 9.4
UniRef50_A4RR13 Cluster: Predicted protein; n=1; Ostreococcus lu... 33 9.4
UniRef50_A5K4I2 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
UniRef50_Q8SVK4 Cluster: Similarity to HYPOTHETICAL INTEGRAL MEM... 33 9.4
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 89.0 bits (211), Expect = 1e-16
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = -1
Query: 697 TAMWVQSRFCRIAVGAPWFLRNVDLHDDLELDPVSKYLQSAFVRHFAKTARHENPLVVAA 518
T +QSRFCR+AVGAPWF+RNVDLHDDL L+ + K+++S R+F K RH+N L+VAA
Sbjct: 839 TLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKHMKSVSERYFDKAMRHDNRLIVAA 898
Query: 517 GNYYP 503
+Y P
Sbjct: 899 ADYSP 903
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 66.9 bits (156), Expect = 5e-10
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = -1
Query: 682 QSRFCRIAVGAPWFLRNVDLHDDLELDPVSKYLQSAFVRHFAKTARHENPLVVAAGNYYP 503
Q+R R G PW++R VDLH +LE+ + Y++S + +F K A H +PLVV+A NY P
Sbjct: 55 QNRVLRKVTGTPWYIRRVDLHRNLEIPSIWTYVKSLTISYFEKAANHPSPLVVSAANYQP 114
Query: 502 I 500
+
Sbjct: 115 V 115
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = -1
Query: 682 QSRFCRIAVGAPWFLRNVDLHDDLELDPVSKYLQSAFVRHFAKTARHENPL 530
QSR RI GAPW+LRN ++H DL++ V + + ++ K H NPL
Sbjct: 816 QSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 42.3 bits (95), Expect = 0.012
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -1
Query: 685 VQSRFCRIAVGAPWFLRNVDLHDDLELDPVSKYLQSAFVRHFAKTARHENPLVVAAGNYY 506
+Q++ R+ G WF+RN LH DL+L V + R+ + RH N L A
Sbjct: 824 IQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNRSR 883
Query: 505 P 503
P
Sbjct: 884 P 884
>UniRef50_Q8IR42 Cluster: CG33968-PA; n=5; Diptera|Rep: CG33968-PA -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 36.7 bits (81), Expect = 0.58
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -3
Query: 371 LFFSWIVYKS--VFVNFFKLLFINGCFSILSLLEKYSYLVFDSSFPVY*IFRCLSNRYRH 198
LFFSWIV+ S + N LF F + + K SY ++ + FPV+ F R+ H
Sbjct: 686 LFFSWIVFVSHNGYTNKLTKLFAWRGFQVST---KLSYAIYLTQFPVF-FFNVGRRRHIH 741
Query: 197 HYFS 186
HY++
Sbjct: 742 HYYN 745
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 34.3 bits (75), Expect = 3.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -1
Query: 682 QSRFCRIAVGAPWFLRNVDLHDDLELDPVSKYLQ 581
Q++F R A APWF+RN LH ++++ + ++ +
Sbjct: 1298 QNKFLRQAFNAPWFVRNNQLHREVKMPTMEEFFR 1331
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = -1
Query: 685 VQSRFCRIAVGAPWFLRNVDLHDDLELDPVSKYLQSAFVRHFAKTARHENPLVVAAGNY 509
VQ++ R APWF+RN +L DL++ + +++ +T NP + +Y
Sbjct: 419 VQNKIIRQISNAPWFIRNKNLEKDLKIPNLKDFIKKLNQDFANRTGTSNNPSLTYTIDY 477
>UniRef50_A1DNP8 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 198
Score = 34.3 bits (75), Expect = 3.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 109 PYRLLDGECHTCSWTSALLLLFIYMLTIIC*CFFLL 2
PY+ L +CHTC W L LL+ + I+ C F L
Sbjct: 88 PYQQLSSKCHTC-WQKHLSLLYATSIVILIRCLFRL 122
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -1
Query: 685 VQSRFCRIAVGAPWFLRNVDLHDDLELDPVSKYLQSAFVRHFAKTARHENPLVVAAG 515
+Q++ R GAPW++R D+ DL++ + LQ+ ++ + H N L G
Sbjct: 829 LQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLG 885
>UniRef50_A5E4P2 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 301
Score = 33.1 bits (72), Expect = 7.1
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -3
Query: 377 YFLFFSWIVYKSVFVNFFKLLFINGCFSILSLLEKYSYLVFDSSFPVY*IFRCLS 213
+F FFS+ + S F +FF L FS LSL +S+ F S F + F S
Sbjct: 70 FFSFFSFFSFFSFF-SFFSFLSFFSFFSFLSLFSFFSFFSFFSFFSFFSFFSFFS 123
>UniRef50_UPI000045D621 Cluster: COG0477: Permeases of the major
facilitator superfamily; n=1; Haemophilus somnus
2336|Rep: COG0477: Permeases of the major facilitator
superfamily - Haemophilus somnus 2336
Length = 409
Score = 32.7 bits (71), Expect = 9.4
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -3
Query: 371 LFFSWIVYKSVFVNFFKLLFINGCF----SILSLLEKYSYLVFDSSFPVY*IFRCLSN 210
L FSW+ +S F+ + K L + CF L+L ++Y VF F V +F L N
Sbjct: 57 LLFSWVCNQSTFIIYSKKLLLPFCFICFLFFLALCFVHNYFVFGIVFIVSSVFTILLN 114
>UniRef50_A4RR13 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein - Ostreococcus
lucimarinus CCE9901
Length = 1399
Score = 32.7 bits (71), Expect = 9.4
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = -2
Query: 633 TWISTMTWSSTPSVSIYSRHSCATSRRRHDMRTLLSWPLETTTRSC 496
TW ST WSSTPS YS +C R R W + TT SC
Sbjct: 970 TWSST--WSSTPSTYSYSAATC--KRDRGKFVDGKCWHMATTDTSC 1011
>UniRef50_A5K4I2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1041
Score = 32.7 bits (71), Expect = 9.4
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Frame = -1
Query: 397 NKTELKFTFYFLVGLYIKAYLL----IFLNYYLLMGVLVF*VS--*KNIHT*YSIRLSQ- 239
NK FTFYF ++I A+LL IF+NY+ + + VF ++ N++T +S
Sbjct: 821 NKFCSSFTFYFFFFIFIYAFLLSIMHIFINYFFYIYLFVFNINIYVSNVYTIIMTFVSLI 880
Query: 238 STRYSGALVTDIDIITSV 185
+ +SG +V +I S+
Sbjct: 881 AIPFSGYIVDNIGSFLSL 898
>UniRef50_Q8SVK4 Cluster: Similarity to HYPOTHETICAL INTEGRAL
MEMBRANE PROTEIN YJJ1_yeast; n=1; Encephalitozoon
cuniculi|Rep: Similarity to HYPOTHETICAL INTEGRAL
MEMBRANE PROTEIN YJJ1_yeast - Encephalitozoon cuniculi
Length = 408
Score = 32.7 bits (71), Expect = 9.4
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -1
Query: 448 ILLIH*RCF*IR---IEINFNKTELKFTFYFLVGLYIKAYLLIFLNYYLLMGVLV 293
+LL RCF +R I +N + + FYFL+ L Y LI Y L+G+LV
Sbjct: 160 VLLGFVRCFTVRWFNISVNPREYGIYINFYFLLALVNFIYSLIRSRYNFLLGLLV 214
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,345,596
Number of Sequences: 1657284
Number of extensions: 11665932
Number of successful extensions: 29319
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 28375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29295
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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