Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40298
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   3.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   3.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.8  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 276 KIFILSIRFVFPSLLDIPV 220
           K+ I S+ F FP  L +PV
Sbjct: 154 KVMIQSVSFAFPINLSVPV 172


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 276 KIFILSIRFVFPSLLDIPV 220
           K+ I S+ F FP  L +PV
Sbjct: 387 KVMIQSVSFAFPINLSVPV 405


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 276 KIFILSIRFVFPSLLDIPV 220
           K+ I S+ F FP  L +PV
Sbjct: 387 KVMIQSVSFAFPINLSVPV 405


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
          transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 93 MVSATHAHGHQH 58
          +VSA H H HQH
Sbjct: 18 VVSAEHPHQHQH 29


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
          protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 93 MVSATHAHGHQH 58
          +VSA H H HQH
Sbjct: 18 VVSAEHPHQHQH 29


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -2

Query: 585 YSRHSCATSRRRHDMRTLLSWPLETTTRSCRS 490
           Y+  +C      +D   + SWP E   + C S
Sbjct: 133 YNMITCPNGLVYNDKAGICSWPDEAKKKGCSS 164


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = -2

Query: 570  CATSRRRHDMRTLLSWPLETTTRSCRSNGKPSTS 469
            CA     +  R +  WP        +   KPSTS
Sbjct: 1131 CAGGLHWNKERKICDWPKSAKCEEKKPGHKPSTS 1164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,965
Number of Sequences: 336
Number of extensions: 3129
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)