Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40297
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding pr...    24   4.4  
AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    24   4.4  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   5.8  

>AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding
           protein AgamOBP46 protein.
          Length = 202

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -3

Query: 194 YIILCGSMLVFGSCN 150
           +++LCGS+LV G+ N
Sbjct: 9   FLVLCGSLLVTGAPN 23


>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -3

Query: 194 YIILCGSMLVFGSCN 150
           +++LCGS+LV G+ N
Sbjct: 9   FLVLCGSLLVTGAPN 23


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 453 DVCLCPYTSHGHCGLLKSGEVSTMKH 530
           D    PY  HG    +   E+ T++H
Sbjct: 114 DAFFTPYIGHGESARIIDAELGTLEH 139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,628
Number of Sequences: 2352
Number of extensions: 16033
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)