Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40297
(610 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071047-1|AAL48669.1| 327|Drosophila melanogaster RE13606p pro... 113 2e-25
AE014296-2122|AAF49936.1| 327|Drosophila melanogaster CG10335-P... 113 2e-25
X87141-1|CAA60619.1| 722|Drosophila melanogaster VND (ventral n... 31 0.93
AL031883-2|CAA21410.1| 723|Drosophila melanogaster EG:118B3.1,F... 31 0.93
AE014298-61|AAF45521.1| 723|Drosophila melanogaster CG6172-PA, ... 31 0.93
BT010273-1|AAQ23591.1| 990|Drosophila melanogaster RE13779p pro... 30 2.8
AE014297-2110|AAF55250.2| 1052|Drosophila melanogaster CG31291-P... 30 2.8
AE014297-2109|AAF55249.2| 1138|Drosophila melanogaster CG31291-P... 30 2.8
>AY071047-1|AAL48669.1| 327|Drosophila melanogaster RE13606p
protein.
Length = 327
Score = 113 bits (271), Expect = 2e-25
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = +3
Query: 255 NRYGVDQLIPLLAELVEKGLKSILIFGIVETLPKDPTGTSADSVDNPVIKALPKLRAAFP 434
+R+G+++L L LV KGL S+L+FG+V+ KD ++ADS NPV+ ALPKLR FP
Sbjct: 52 SRFGLNRLKEHLEPLVAKGLSSVLLFGVVDPDMKDEQASNADSAKNPVVLALPKLREWFP 111
Query: 435 DLLIACDVCLCPYTSHGHCGLL 500
DLLIACDVC+CPY+SHGHCGLL
Sbjct: 112 DLLIACDVCICPYSSHGHCGLL 133
Score = 65.3 bits (152), Expect = 6e-11
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +1
Query: 106 EHVLQGGYHHAALRKLQEPNTSIEPHNIMYPVFLIEKDNAIEPVHSMPNVT 258
E L G HHA LR+LQE I PHN+MYPVF++ D+ ++P+ SMP ++
Sbjct: 2 ERKLHSGMHHATLRQLQESGCEIAPHNLMYPVFIVSNDDDVQPIASMPGIS 52
Score = 57.2 bits (132), Expect = 2e-08
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = +2
Query: 512 GIDHEASVKRIAEVALAYAKAGAHVVAPSDMMD 610
G+++ S+KRIAE+A+AYAKAGAH+VAPSDMMD
Sbjct: 137 GLENGPSIKRIAEIAVAYAKAGAHIVAPSDMMD 169
>AE014296-2122|AAF49936.1| 327|Drosophila melanogaster CG10335-PA
protein.
Length = 327
Score = 113 bits (271), Expect = 2e-25
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = +3
Query: 255 NRYGVDQLIPLLAELVEKGLKSILIFGIVETLPKDPTGTSADSVDNPVIKALPKLRAAFP 434
+R+G+++L L LV KGL S+L+FG+V+ KD ++ADS NPV+ ALPKLR FP
Sbjct: 52 SRFGLNRLKEHLEPLVAKGLSSVLLFGVVDPDMKDEQASNADSAKNPVVLALPKLREWFP 111
Query: 435 DLLIACDVCLCPYTSHGHCGLL 500
DLLIACDVC+CPY+SHGHCGLL
Sbjct: 112 DLLIACDVCICPYSSHGHCGLL 133
Score = 65.3 bits (152), Expect = 6e-11
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +1
Query: 106 EHVLQGGYHHAALRKLQEPNTSIEPHNIMYPVFLIEKDNAIEPVHSMPNVT 258
E L G HHA LR+LQE I PHN+MYPVF++ D+ ++P+ SMP ++
Sbjct: 2 ERKLHSGMHHATLRQLQESGCEIAPHNLMYPVFIVSNDDDVQPIASMPGIS 52
Score = 57.2 bits (132), Expect = 2e-08
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = +2
Query: 512 GIDHEASVKRIAEVALAYAKAGAHVVAPSDMMD 610
G+++ S+KRIAE+A+AYAKAGAH+VAPSDMMD
Sbjct: 137 GLENGPSIKRIAEIAVAYAKAGAHIVAPSDMMD 169
>X87141-1|CAA60619.1| 722|Drosophila melanogaster VND (ventral
nervous system defective)protein.
Length = 722
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -1
Query: 364 VGSLGSVSTIPKMSIDLSPFSTSSAKRGMSWSTPYL 257
+GS GS+ P+ +I +SP S ++ KR + STP L
Sbjct: 26 LGSAGSLPASPQSAITVSPSSPATPKRPLRTSTPSL 61
>AL031883-2|CAA21410.1| 723|Drosophila melanogaster
EG:118B3.1,FBgn0003986;vnd protein.
Length = 723
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -1
Query: 364 VGSLGSVSTIPKMSIDLSPFSTSSAKRGMSWSTPYL 257
+GS GS+ P+ +I +SP S ++ KR + STP L
Sbjct: 26 LGSAGSLPASPQSAITVSPSSPATPKRPLRTSTPSL 61
>AE014298-61|AAF45521.1| 723|Drosophila melanogaster CG6172-PA,
isoform A protein.
Length = 723
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -1
Query: 364 VGSLGSVSTIPKMSIDLSPFSTSSAKRGMSWSTPYL 257
+GS GS+ P+ +I +SP S ++ KR + STP L
Sbjct: 26 LGSAGSLPASPQSAITVSPSSPATPKRPLRTSTPSL 61
>BT010273-1|AAQ23591.1| 990|Drosophila melanogaster RE13779p
protein.
Length = 990
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/78 (24%), Positives = 28/78 (35%)
Frame = +1
Query: 49 TYSHLIKETKIMSNLYLTPEHVLQGGYHHAALRKLQEPNTSIEPHNIMYPVFLIEKDNAI 228
TY H + + + SNL +L H + L TS+ P Y I
Sbjct: 594 TYKHKEEISALQSNLEYLSNRMLSNEEHMSKLDSSPHDYTSLVPGKAAYDYQAATYGTPI 653
Query: 229 EPVHSMPNVTDMVLTNSY 282
EP+ S P + + Y
Sbjct: 654 EPIQSTPQPHNSASDSDY 671
>AE014297-2110|AAF55250.2| 1052|Drosophila melanogaster CG31291-PA,
isoform A protein.
Length = 1052
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/78 (24%), Positives = 28/78 (35%)
Frame = +1
Query: 49 TYSHLIKETKIMSNLYLTPEHVLQGGYHHAALRKLQEPNTSIEPHNIMYPVFLIEKDNAI 228
TY H + + + SNL +L H + L TS+ P Y I
Sbjct: 594 TYKHKEEISALQSNLEYLSNRMLSNEEHMSKLDSSPHDYTSLVPGKAAYDYQAATYGTPI 653
Query: 229 EPVHSMPNVTDMVLTNSY 282
EP+ S P + + Y
Sbjct: 654 EPIQSTPQPHNSASDSDY 671
>AE014297-2109|AAF55249.2| 1138|Drosophila melanogaster CG31291-PB,
isoform B protein.
Length = 1138
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/78 (24%), Positives = 28/78 (35%)
Frame = +1
Query: 49 TYSHLIKETKIMSNLYLTPEHVLQGGYHHAALRKLQEPNTSIEPHNIMYPVFLIEKDNAI 228
TY H + + + SNL +L H + L TS+ P Y I
Sbjct: 680 TYKHKEEISALQSNLEYLSNRMLSNEEHMSKLDSSPHDYTSLVPGKAAYDYQAATYGTPI 739
Query: 229 EPVHSMPNVTDMVLTNSY 282
EP+ S P + + Y
Sbjct: 740 EPIQSTPQPHNSASDSDY 757
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,971,792
Number of Sequences: 53049
Number of extensions: 637709
Number of successful extensions: 1681
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1681
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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