Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40296
(463 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 95 3e-20
Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 40 9e-04
AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical... 28 2.8
AL032635-4|CAA21601.1| 140|Caenorhabditis elegans Hypothetical ... 28 2.8
AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical ... 28 2.8
AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical ... 28 2.8
U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine rece... 28 3.7
Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 6.5
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 6.5
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 6.5
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 6.5
U55366-8|AAZ91347.1| 287|Caenorhabditis elegans Serpentine rece... 27 6.5
U88181-1|AAB42305.1| 149|Caenorhabditis elegans Hypothetical pr... 27 8.6
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 27 8.6
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 94.7 bits (225), Expect = 3e-20
Identities = 44/62 (70%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Frame = -1
Query: 259 FQTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEK-KRPTRKQRKERKNRMKKVR 83
F++ GGGKS GFAL+YDT+D AKKFEPK+RL R GL K ++P RKQRKERKNR KKVR
Sbjct: 60 FESKIGGGKSKGFALVYDTIDFAKKFEPKYRLVRMGLATKVEKPGRKQRKERKNRQKKVR 119
Query: 82 GT 77
GT
Sbjct: 120 GT 121
Score = 87.4 bits (207), Expect = 4e-18
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = -2
Query: 420 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGF 256
TIRTRK +TN+LL RKQMV +V+HPG+PTV K +IREK+AK+YK TPD V FGF
Sbjct: 6 TIRTRKVLTNKLLYRKQMVVEVIHPGRPTVPKADIREKIAKLYKTTPDTVIPFGF 60
>Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical
protein T26G10.3 protein.
Length = 91
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -2
Query: 369 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 271
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 39.9 bits (89), Expect = 9e-04
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 226 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 98
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical
protein Y105E8A.28 protein.
Length = 210
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 206 HTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGP 84
H R+ + R + V PP+ E E A A EQN GP
Sbjct: 26 HLRNEELHRFRQAVPPPQQAEEAEEEADVAENVVEQNRLGP 66
>AL032635-4|CAA21601.1| 140|Caenorhabditis elegans Hypothetical
protein Y51A2A.6 protein.
Length = 140
Score = 28.3 bits (60), Expect = 2.8
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = -1
Query: 289 GYSRCSVRIRFQTNFGGGKSTGFALI----YDTLDLAKKFEPKHRLARHGLYEKKRPTRK 122
G S C+ F N GGGK+ GF+ + + KK H HG + RPTR
Sbjct: 13 GISACTAI--FVKNNGGGKNHGFSSASSSSSSSSEEGKKHGHGHHHHNHGRPSRPRPTRP 70
Query: 121 QR 116
R
Sbjct: 71 PR 72
>AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical
protein C45H4.14b protein.
Length = 131
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 214 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 89
I LD KK E KHR A+ +K+ ++Q K+ K +KK
Sbjct: 17 ILKKLDEKKKTEEKHR-AKQERQAQKKGAKEQAKKEKAELKK 57
>AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical
protein C45H4.14a protein.
Length = 178
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 214 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 89
I LD KK E KHR A+ +K+ ++Q K+ K +KK
Sbjct: 64 ILKKLDEKKKTEEKHR-AKQERQAQKKGAKEQAKKEKAELKK 104
>U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine
receptor, class x protein74 protein.
Length = 323
Score = 27.9 bits (59), Expect = 3.7
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +2
Query: 308 FSRISVLLTV-GFPGCKTSQTICL-RA-NNLLVMNLRVRIVAVPSLILNY 448
FS + V L V GF + ICL RA NN++V+ + I P+L+L+Y
Sbjct: 22 FSSLIVYLYVSGFAEKTSFNVICLVRAVNNIIVLVVNFLIFLFPTLLLSY 71
>Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical
protein F57G8.3 protein.
Length = 331
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 17 IHLYLAFTSLLGGRTYFRFLGTADL-LHSV---LTFFTLFARGPLLLVQAVAG*PVLGLE 184
+HL+ A+ + + + T+ L LH V + FFT F P+L++ AG P+ L
Sbjct: 29 VHLFGAYIIIFKTPDKMKSVRTSMLSLHLVGAFVDFFTSFLTAPVLILPVCAGYPLGVLG 88
Query: 185 LLG 193
+LG
Sbjct: 89 MLG 91
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 145 EKKRPTRKQRKERKNRMKKVR 83
E+KR +K+R ERK +KVR
Sbjct: 820 ERKREKKKERDERKKEKEKVR 840
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 145 EKKRPTRKQRKERKNRMKKVR 83
E+KR +K+R ERK +KVR
Sbjct: 1111 ERKREKKKERDERKKEKEKVR 1131
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 145 EKKRPTRKQRKERKNRMKKVR 83
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 145 EKKRPTRKQRKERKNRMKKVR 83
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 145 EKKRPTRKQRKERKNRMKKVR 83
E+KR +K+R ERK +KVR
Sbjct: 820 ERKREKKKERDERKKEKEKVR 840
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 145 EKKRPTRKQRKERKNRMKKVR 83
E+KR +K+R ERK +KVR
Sbjct: 1111 ERKREKKKERDERKKEKEKVR 1131
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 145 EKKRPTRKQRKERKNRMKKVR 83
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 145 EKKRPTRKQRKERKNRMKKVR 83
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>U55366-8|AAZ91347.1| 287|Caenorhabditis elegans Serpentine
receptor, class x protein73 protein.
Length = 287
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +2
Query: 353 KTS-QTICL-RA-NNLLVMNLRVRIVAVPSLILNY 448
KTS ICL RA NN++V+ ++ PSL+L+Y
Sbjct: 4 KTSFNVICLTRAVNNIIVLVFNFLVITFPSLLLSY 38
>U88181-1|AAB42305.1| 149|Caenorhabditis elegans Hypothetical
protein C55B6.4 protein.
Length = 149
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 239 TSEVCLKPNTNTTSGVTLY 295
T E+CL+P+TN+T LY
Sbjct: 71 TLEICLQPSTNSTVSNVLY 89
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 91 SSFCSYVLYAVCAWASSSRTGRGGLTC 171
+SFC+Y L+ CA + + GG C
Sbjct: 99 ASFCNYPLFVFCAGSIGLGSWMGGCVC 125
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
protein F42C5.10 protein.
Length = 1292
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 355 NIANHLLARQQSVGHELASANSRCSFTHFELFSI 456
N NH+L++ + V H ++ ANSR + E+ +I
Sbjct: 784 NEENHILSQTRPVSHPVSRANSRPTTPGLEIKTI 817
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,998,637
Number of Sequences: 27780
Number of extensions: 224384
Number of successful extensions: 756
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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