Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40295
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   6.4  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   6.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   8.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   8.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.4  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 236 DMMSEDHQQATVHLLCGS*EVNPS-LQMH 153
           +++ ED+Q+  V  +CG     PS L+ H
Sbjct: 240 NLLEEDNQKPNVCRICGKSYARPSTLKTH 268


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 611 IRQGFCCSSSHIIVKTKLQHGHH 543
           ++Q FC  + +I    KL +GH+
Sbjct: 191 LKQKFCVVNQYIKQVCKLNNGHY 213


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 611 IRQGFCCSSSHIIVKTKLQHGHH 543
           ++Q FC  + +I    KL +GH+
Sbjct: 16  LKQKFCVVNQYIKQVCKLNNGHY 38


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = -3

Query: 381 FNGF*I--FIIKKCYFWLHCCCTHYRLH 304
           F+GF +   ++ K  +WLH  C    LH
Sbjct: 93  FSGFIVPSGVVYKIGYWLHQICHICELH 120


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -3

Query: 345 YFWLHCCC 322
           Y+WL+ CC
Sbjct: 55  YYWLNVCC 62


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 676 LNCLKPLTLSPNQEVQVEL 732
           L C+K L   PNQ V+  L
Sbjct: 329 LPCVKELVADPNQHVKSAL 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,672
Number of Sequences: 336
Number of extensions: 3769
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)