Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40294
(758 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 6e-29
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 1e-24
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 107 1e-23
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 83 2e-16
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 34 0.11
SB_11365| Best HMM Match : Dor1 (HMM E-Value=0) 32 0.58
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_53330| Best HMM Match : TSC22 (HMM E-Value=6.6) 30 2.3
SB_34988| Best HMM Match : zf-CCHC (HMM E-Value=3e-12) 29 4.1
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 7.2
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 124 bits (300), Expect = 6e-29
Identities = 59/85 (69%), Positives = 67/85 (78%)
Frame = +2
Query: 254 SYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLI 433
+YKNVVGA+RSSWRVISSIEQK EGSERK+Q + YR +E EL E+C VL LL+ LI
Sbjct: 26 AYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTETYRQTIENELNEVCETVLKLLESKLI 85
Query: 434 PKASNPESKVFYLKMKGDYYRYLAE 508
P A + ESKVFYLKMKGDYYRY E
Sbjct: 86 PNAQSTESKVFYLKMKGDYYRYEGE 110
Score = 107 bits (258), Expect = 7e-24
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = +1
Query: 508 MATGETRHSVVEDSQKAYQDAFEISKA--KMQPTHPIRLGLALNFSVFYYEILNSPDKAC 681
+A + R VV+ + KAY +A EI++ K+ PT PIRLGLALNFSVFYYEI+ +AC
Sbjct: 111 VAGADRRREVVQKAMKAYSEAQEIAEKDPKLPPTDPIRLGLALNFSVFYYEIVEDSKQAC 170
Query: 682 QLAKQAFDDAIAELDTLNEDSYKDS 756
LAK+AFDDAIAELDTL+ED YKDS
Sbjct: 171 DLAKKAFDDAIAELDTLSEDQYKDS 195
Score = 102 bits (244), Expect = 4e-22
Identities = 50/78 (64%), Positives = 64/78 (82%), Gaps = 3/78 (3%)
Frame = +1
Query: 532 SVVEDSQKAYQDAFEISKA---KMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAF 702
+VVE + +AY++A E ++ K+ PT PIRLGLALNFSVF+YEI + ++AC+LAKQAF
Sbjct: 207 TVVEKALQAYKEAKEAAETGDGKLAPTDPIRLGLALNFSVFHYEIQENQEEACKLAKQAF 266
Query: 703 DDAIAELDTLNEDSYKDS 756
DDAIAELD+LNED YKDS
Sbjct: 267 DDAIAELDSLNEDQYKDS 284
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +3
Query: 180 MAAAMKEVTETGVELSNEERNLLSV 254
MA AMKE TE L EERNLLSV
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSV 25
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 110 bits (264), Expect = 1e-24
Identities = 52/86 (60%), Positives = 69/86 (80%)
Frame = +2
Query: 254 SYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLI 433
SYKN+VG RRSSWRVISSIE+KT S + K+Y+ +EKEL+++C +VLG+L++ LI
Sbjct: 128 SYKNIVGQRRSSWRVISSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LI 185
Query: 434 PKASNPESKVFYLKMKGDYYRYLAEW 511
P A + E+KVFY K+KGDYYRYLAE+
Sbjct: 186 PGAEDEENKVFYFKLKGDYYRYLAEF 211
Score = 58.4 bits (135), Expect = 6e-09
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +3
Query: 111 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSV 254
M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS EERNLLSV
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSV 127
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 107 bits (256), Expect = 1e-23
Identities = 50/83 (60%), Positives = 65/83 (78%)
Frame = +1
Query: 508 MATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQL 687
+A G++R +E S++AY+DA ++ P+HPIRLGLALNFSVFYYEI N P +AC+L
Sbjct: 141 VAEGDSRKENIEKSREAYKDA-SAKAEELSPSHPIRLGLALNFSVFYYEIENKPPEACKL 199
Query: 688 AKQAFDDAIAELDTLNEDSYKDS 756
AK+AFDDAIA LD L ++SYKDS
Sbjct: 200 AKEAFDDAIAVLDNLKDESYKDS 222
Score = 92.7 bits (220), Expect = 3e-19
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 SYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLI 433
+YKNVVGARRSSWRVISS+EQK E + K+YR + EL C +VL +L+ +L+
Sbjct: 55 AYKNVVGARRSSWRVISSMEQK--APEEMAALTKKYREDITNELNGKCAEVLDILENYLL 112
Query: 434 PKAS---NPESKVFYLKMKGDYYRYLAE 508
N E+KVFYLKM+GDY+RYL E
Sbjct: 113 KDGQDDINTEAKVFYLKMRGDYHRYLVE 140
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = +3
Query: 99 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSV 254
P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++EERNLLSV
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSV 54
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = +2
Query: 254 SYKNVVGARRSSWRVISSIEQKTEGSER---KQQMAKEYRVKVEKELREICYDVLGLLDK 424
+YKNV+GARR+SWR+I+SIEQK E K +M + YR +E+EL+ IC ++L LLD
Sbjct: 48 AYKNVIGARRASWRIITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDD 107
Query: 425 HLIPKASNPESKVFYLKM 478
LI + + ESKVFY K+
Sbjct: 108 SLIKNSQSEESKVFYNKI 125
Score = 66.9 bits (156), Expect = 2e-11
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +3
Query: 120 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSV 254
DKEE V AKLAEQAERYDDM +MKEV + G ELS E+RNLLSV
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSV 47
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +3
Query: 111 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSV 254
M + ELVQ AKLAEQ ER++D+ MK+ E L+ E RNLLSV
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSV 233
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +2
Query: 257 YKNVVGARRSSWRVISSIEQKTEGSERKQQMAK--EYRVKVEKELREICYDVL 409
YKNVVG++R +WR + ++ R Q+ +Y+ K+E EL+ +C ++L
Sbjct: 235 YKNVVGSKRFAWRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 868
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 565 LGMLSVNPLQQNVWFLLWPFCKVPVVI--SFHFEVKHFTFWI 446
L +LS +P++ W+L W CK ++ +FE+KH + +
Sbjct: 781 LKLLSEDPIEVQYWYLEWTICKTRNIMLRDLNFEIKHIDYML 822
>SB_11365| Best HMM Match : Dor1 (HMM E-Value=0)
Length = 587
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +2
Query: 251 SSYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHL 430
SSY + + S+ VI SI Q +GS + M + +++ +L C V+G L +
Sbjct: 142 SSYIKRLEKKLSNIPVIQSIVQAVQGSTQLMLMQLQQQLRSSIQL-PACLRVIGYLRR-- 198
Query: 431 IPKASNPESKVFYLKMKGDYYR-YLAEWPQEKP 526
+ S PE ++ +L+ +G + + L+ P + P
Sbjct: 199 LEVFSEPELRIKFLQARGAWLQSVLSSVPSDDP 231
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 87 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 239
+SPLPS+ +E+V KLAE+ E ++++ T+ E + EE+
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 505 RMATGETRHS-VVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 666
R A GETR + D+ +A +D KA+ Q + ALN S+F++E++NS
Sbjct: 4018 REALGETRRKRSLVDTPEANED-----KAQHQVPDAEKCQFALNASLFFFEVINS 4067
>SB_53330| Best HMM Match : TSC22 (HMM E-Value=6.6)
Length = 97
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = +2
Query: 251 SSYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHL 430
SSY + + S+ VI SI Q +GS + M + +++ +L C V+G L +
Sbjct: 18 SSYIKRLEKKLSNIPVIQSIVQAVQGSTQLMLMQLQQQLRSSIQL-PACLRVIGYLRR-- 74
Query: 431 IPKASNPESKVFYLKMKG 484
+ S PE ++ +L+ +G
Sbjct: 75 LEVFSEPELRIKFLQARG 92
>SB_34988| Best HMM Match : zf-CCHC (HMM E-Value=3e-12)
Length = 469
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = +2
Query: 179 HGGRDEGSDGNRRRT*QRGEEPPFSSYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 358
H +G R R + +P +YK + +R+ ++ EG +K++ +
Sbjct: 269 HAHTPHSHEGKRGRKREHDRDPD-QNYKKSISSRKGRMQIQIQNSPLEEGQSKKRRKKNK 327
Query: 359 YRVKVEKE 382
RV EKE
Sbjct: 328 KRVSDEKE 335
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 28.7 bits (61), Expect = 5.4
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +2
Query: 293 RVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYL 472
R++ IE+K E E ++ AKE + + E+E + IC L+ + + E + L
Sbjct: 919 RIMKEIEEK-EKKEEAERKAKEEKEREERERKRIC---------QLLKEKAEQERREREL 968
Query: 473 KMKGDYYRYLAE--WPQEKPDILL*RIHRKHTKMLLKSARRKCSP 601
K + + R E +E+ L + RK + LK K P
Sbjct: 969 KAREEKLRLAREQMMREERERTLKLELERKRMEERLKDQASKNDP 1013
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 281 RSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 448
+ W ++S E+ +ER++Q E +VK E++ R+ ++ + HL K SN
Sbjct: 338 KHQWNLLSEDEKNKIKAERRKQKRLELKVKREEKERKRLEELKRVSFAHLGMKLSN 393
>SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +3
Query: 102 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVLIRMS*VPD 281
S TM ++ ++ ++ + A+R++ M E+ + VE+ +N S RM+
Sbjct: 850 SPTMGAERPRKMRMGRILKMAQRWN-MGGTYLELP-SAVEIDGVMKNQTSGYPRMTRARA 907
Query: 282 GHHGVSFPQLNRK 320
G + FP+ NRK
Sbjct: 908 GCFVMRFPKFNRK 920
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 338 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 439
K++M ++Y K+EKE+ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,106,817
Number of Sequences: 59808
Number of extensions: 493020
Number of successful extensions: 1442
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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