Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40293
(648 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 28 0.089
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 2.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.5
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.5
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 3.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 3.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 3.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 3.4
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 3.4
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 22 4.4
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 7.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 7.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 7.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 7.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 7.8
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 27.9 bits (59), Expect = 0.089
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 417 ASSQQCCWK*LVYVVHSAWRIHVCILTHGHSLSWG 313
A++ CW + Y+V AW I ++ L WG
Sbjct: 65 AAAVMSCWMNVYYIVILAWAIFYFFMSMRSELPWG 99
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 571 PVDIMNGLLAPTTSWIVQFEG 509
P I+NG P T+W+ F G
Sbjct: 150 PGKIVNGKRVPPTNWVGVFGG 170
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/28 (25%), Positives = 14/28 (50%)
Frame = -1
Query: 399 CWK*LVYVVHSAWRIHVCILTHGHSLSW 316
CW + Y++ AW + +++ L W
Sbjct: 109 CWTNIYYIIILAWALFYLLVSLRIDLPW 136
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/28 (25%), Positives = 14/28 (50%)
Frame = -1
Query: 399 CWK*LVYVVHSAWRIHVCILTHGHSLSW 316
CW + Y++ AW + +++ L W
Sbjct: 162 CWTNIYYIIILAWALFYLLVSLRIDLPW 189
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.5
Identities = 12/41 (29%), Positives = 15/41 (36%)
Frame = +2
Query: 209 CNCLDCAK*TMVCLYAE*GYCEYATYRRALHCLGIPQLKEC 331
C C C T C + G C Y + G P + EC
Sbjct: 435 CECKTCNSKTKCCFAQDDGLCPYTLKHKIRVPPGTP-IYEC 474
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 571 PVDIMNGLLAPTTSWIVQFEG 509
P I+NG P T+W+ F G
Sbjct: 150 PGKIVNGKRVPPTNWVGVFGG 170
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKER 81
RS + + RE K+ QY K Y KE+
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLYNEKEK 28
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKER 81
RS + + RE K+ QY K Y KE+
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLYNEKEK 28
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKER 81
RS + + RE K+ QY K Y KE+
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLYNEKEK 28
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKER 81
RS + + RE K+ QY K Y KE+
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLYNEKEK 28
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 552 VFLRQPPVGLFNLKG 508
+F PP G FN+KG
Sbjct: 225 LFYPYPPYGTFNIKG 239
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 400 LLEVIGIRCPLSLAN 356
++E+IGI C L LAN
Sbjct: 206 IVELIGIICALCLAN 220
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 41
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 41
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 41
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 41
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 41
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 41
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 41
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 41
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 41
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 2 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 41
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 235 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 274
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 RSSAIKKKREIFKRAEQYVKEYRIKERD-EIRLARQARNR 117
RS + + RE K+ QY K + KE+ E R +R+ +R
Sbjct: 235 RSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRYSR 274
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,160
Number of Sequences: 438
Number of extensions: 4735
Number of successful extensions: 34
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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