Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40292
         (465 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          27   0.11 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   1.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   2.4  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   2.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   9.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   9.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   9.8  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 26.6 bits (56), Expect = 0.11
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 213 VDRHITFKNQNAPNWISCSKITILPL 290
           +DR++ F +QN  NW+  S   +L +
Sbjct: 796 IDRNVVFSSQNNTNWVPTSLNRLLDM 821


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 127 RICSAEFISQIFNILTSYLQHNYFVSLDSLIS 32
           R+C+    +  FN     ++  YF  LDSL+S
Sbjct: 247 RLCNKLKRATRFNDFNEAIKEAYFPKLDSLVS 278


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 232 SKIKMRPIGYPAAKLRSYHWSV 297
           SKIK    G  A+KL   HW +
Sbjct: 232 SKIKKHIDGMAASKLNVLHWHI 253


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 238 IKMRPIGYPAAKLRSYHWSV 297
           IK    G  A+KL S+HW +
Sbjct: 227 IKRTLDGMAASKLNSFHWHI 246


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 103 SQIFNILTSYLQHNYFVSL 47
           +Q  NI+ S  QH Y VSL
Sbjct: 498 TQEINIMKSVRQHPYIVSL 516


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 126 GYAQLNLFHKYSIF*HLIYNIIILSVWIHSFQFY 25
           G+  LN  HKY    HL+    IL +   +F+ Y
Sbjct: 88  GFTILNSMHKYQPRFHLVRANDILKLPYSTFRTY 121


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 104 FTNIQYFDI 78
           FTN+QY DI
Sbjct: 113 FTNLQYIDI 121


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 245 ILIFECDMTIYHIFCITY 192
           +L+F    T Y++ CI Y
Sbjct: 281 VLVFFVCWTPYYVMCIWY 298


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 245 ILIFECDMTIYHIFCITY 192
           +L+F    T Y++ CI Y
Sbjct: 281 VLVFFVCWTPYYVMCIWY 298


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +2

Query: 254 LDILQQNYD 280
           +D+LQ+NYD
Sbjct: 1   MDVLQKNYD 9


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,205
Number of Sequences: 336
Number of extensions: 2130
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)