Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40291
         (606 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot...    29   6.5  
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot...    29   6.5  
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot...    29   6.5  

>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
           protein.
          Length = 1396

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -3

Query: 160 TSQPTWCFYFLLLRWVEELTAHLVLSGYWRHRHLQRKCATHLEI 29
           T+ P W  Y +   W+    A  +L   + H HLQ KC    E+
Sbjct: 22  TTTPVWN-YEINFAWMYPSVAQRLLILIFAHEHLQWKCVAEFEL 64


>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
           protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -3

Query: 160 TSQPTWCFYFLLLRWVEELTAHLVLSGYWRHRHLQRKCATHLEI 29
           T+ P W  Y +   W+    A  +L   + H HLQ KC    E+
Sbjct: 22  TTTPVWN-YEINFAWMYPSVAQRLLILIFAHEHLQWKCVAEFEL 64


>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
           protein.
          Length = 1659

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -3

Query: 160 TSQPTWCFYFLLLRWVEELTAHLVLSGYWRHRHLQRKCATHLEI 29
           T+ P W  Y +   W+    A  +L   + H HLQ KC    E+
Sbjct: 244 TTTPVWN-YEINFAWMYPSVAQRLLILIFAHEHLQWKCVAEFEL 286


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,543,679
Number of Sequences: 53049
Number of extensions: 499426
Number of successful extensions: 871
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)