Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40287
(282 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 26 0.23
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 0.53
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 25 0.53
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 24 0.93
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 22 3.8
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 22 3.8
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 22 3.8
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 22 3.8
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 22 5.0
AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein. 21 6.6
U43499-1|AAA93302.1| 278|Anopheles gambiae a-emp protein. 21 8.7
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 21 8.7
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 21 8.7
AY146744-1|AAO12104.1| 176|Anopheles gambiae odorant-binding pr... 21 8.7
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 21 8.7
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 26.2 bits (55), Expect = 0.23
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 97 VIAAIVDGICFVSIYVPHPSLQIFNEIKNLI 5
++AA V GI F+S+Y P PSL +E + L+
Sbjct: 140 LVAAQVAGITFISVYAP-PSLSA-HEFERLL 168
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 25.0 bits (52), Expect = 0.53
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 112 SNCFSVIAAIVDGICFVSIYVPHPSLQI 29
S ++AA + G+ F+S Y P PSL +
Sbjct: 83 SEAQGLVAAQIGGVVFISCYAP-PSLNL 109
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 25.0 bits (52), Expect = 0.53
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3
Query: 97 VIAAIVDGICFVSIYVPHPSL 35
++AA V GI F+S+Y P PSL
Sbjct: 77 LVAAKVAGIDFISVYAP-PSL 96
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 24.2 bits (50), Expect = 0.93
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -3
Query: 97 VIAAIVDGICFVSIYVPHPSL 35
+IAA V GI F+S Y P PSL
Sbjct: 134 LIAAKVGGITFLSCYAP-PSL 153
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 73 ICFVSIYVPHPSLQIFNEIKNL 8
ICF ++ VP+PS N + +L
Sbjct: 106 ICFRTLKVPNPSYGDLNHLVSL 127
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 73 ICFVSIYVPHPSLQIFNEIKNL 8
ICF ++ VP+PS N + +L
Sbjct: 106 ICFRTLKVPNPSYGDLNHLVSL 127
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 73 ICFVSIYVPHPSLQIFNEIKNL 8
ICF ++ VP+PS N + +L
Sbjct: 106 ICFRTLKVPNPSYGDLNHLVSL 127
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 73 ICFVSIYVPHPSLQIFNEIKNL 8
ICF ++ VP+PS N + +L
Sbjct: 106 ICFRTLKVPNPSYGDLNHLVSL 127
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -3
Query: 121 PSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNL 8
P FS + I F++I HP+ N +NL
Sbjct: 354 PDRLEVFSTVKEITG---FINIQAHHPNFTTLNYFRNL 388
>AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein.
Length = 438
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -3
Query: 91 AAIVDGICFVSIYVPHPSLQIFNEI 17
+++V + +YV H +FNEI
Sbjct: 77 SSLVAMVAITVVYVTHKKQAMFNEI 101
>U43499-1|AAA93302.1| 278|Anopheles gambiae a-emp protein.
Length = 278
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 11 VFNFIEDLQGGMRD 52
V+ F EDL GG+ D
Sbjct: 36 VYIFNEDLSGGLED 49
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 21.0 bits (42), Expect = 8.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -3
Query: 139 FSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSL 35
F+ F S +++ I VS+YV HP L
Sbjct: 558 FTRFTQEIFSALITLLFIFETSIKLVSVYVRHPLL 592
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 117 EGRGKEEKVLEFLMSRHTPPYPSALSS 197
+G G + + ++ TPP P++LSS
Sbjct: 771 DGSGSGSRCSKPSVTSTTPPTPASLSS 797
>AY146744-1|AAO12104.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP8 protein.
Length = 176
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 205 CLREDRADGYGGVCL 161
CLRE A GG CL
Sbjct: 145 CLREPPAPDSGGGCL 159
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +2
Query: 245 PGFNRENIKGL 277
PGF+R ++KG+
Sbjct: 513 PGFDRRSVKGM 523
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,641
Number of Sequences: 2352
Number of extensions: 4684
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 16515522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -