Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40287
(282 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical pr... 27 2.1
U80028-2|AAN73869.1| 351|Caenorhabditis elegans Serpentine rece... 27 2.1
Z78546-5|CAO79773.1| 962|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z78546-4|CAB01771.3| 920|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light c... 27 2.7
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 27 2.7
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 25 8.4
U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta... 25 8.4
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto... 25 8.4
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 25 8.4
AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L prot... 25 8.4
AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep... 25 8.4
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 25 8.4
AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine r... 25 8.4
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 25 8.4
>Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical
protein T06D8.10 protein.
Length = 1490
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 148 SSTFSSFPLPSHSNCFSVIAAIVDGIC 68
SST S+ P+P+ +CF+ GIC
Sbjct: 141 SSTISNCPIPTIDHCFATNYRSFSGIC 167
>Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical
protein T06D8.10 protein.
Length = 1490
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 148 SSTFSSFPLPSHSNCFSVIAAIVDGIC 68
SST S+ P+P+ +CF+ GIC
Sbjct: 141 SSTISNCPIPTIDHCFATNYRSFSGIC 167
>U80028-2|AAN73869.1| 351|Caenorhabditis elegans Serpentine
receptor, class h protein88 protein.
Length = 351
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 178 YGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDGI--CFVSIYVPHPSLQIFN 23
+GG C+L ++ SS+ +P + F V + D C V+ Y+ P+L F+
Sbjct: 45 FGGYCILYKSPKEMSSYRVPLFN--FHVWTCLADVFLNCLVTPYIFLPTLTGFS 96
>Z78546-5|CAO79773.1| 962|Caenorhabditis elegans Hypothetical
protein T21H8.1b protein.
Length = 962
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 199 REDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVD 77
R +D YG VC+L ++ T SS S ++ AA+VD
Sbjct: 4 RHSISDAYGAVCILPEDTLTVSS----SQNSHIDAFAALVD 40
>Z78546-4|CAB01771.3| 920|Caenorhabditis elegans Hypothetical
protein T21H8.1a protein.
Length = 920
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 199 REDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVD 77
R +D YG VC+L ++ T SS S ++ AA+VD
Sbjct: 4 RHSISDAYGAVCILPEDTLTVSS----SQNSHIDAFAALVD 40
>Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light
chain (isoform 2) protein.
Length = 522
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 75 PSTIAAMTEKQLLCEGRGKEEKVLEFLMSRHTPPYPSALSSLKHE*PGILNTKSGFSQVS 254
P + LLC+ +GK E+V E R Y S L + P + NTK+ S
Sbjct: 350 PDVAKQLNNLALLCQNQGKYEEV-EKYYKRALEIYESKLGP---DDPNVANTKNNLSSAY 405
Query: 255 IEK 263
+++
Sbjct: 406 LKQ 408
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -3
Query: 271 FYIFSIETWLKPDFVFKIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNC 104
F I+S + + F+ G C D+ VC+ + S+ +SF PS SNC
Sbjct: 87 FKIWSSQKLSERQFLGMNEGMDC---DKLKVGKEVCVAVGTKSSRNSFAAPSQSNC 139
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -3
Query: 172 GVCLLIRNSSTFSSFP--LPSHSNCFSVIAAIVDGICFVSIYVPHPS 38
GVCLL + + +P H+ + + + C S+YV HPS
Sbjct: 3596 GVCLLTSDDVVCGNLADFVPQHAALHPFVVSCIR--CTCSLYVQHPS 3640
>Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical
protein C52E4.6a protein.
Length = 480
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 29 DLQGGMRDIDRDKTDTINNSCNDRKAVTM*REREGRKGARVSD 157
D +G RD D+D+ D + DR+ T R R+ + R D
Sbjct: 421 DGRGDRRDRDKDRGDRRKDEKKDRRKRTRSRSRDRKDKNRNRD 463
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -3
Query: 223 KIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSV 95
K PG + R GGV + RN + F P P+ SV
Sbjct: 270 KTPGSKDNKNQRDKREGGVMKMFRNLNPFDRTPTPTTKKTQSV 312
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -3
Query: 172 GVCLLIRNSSTFSSFP--LPSHSNCFSVIAAIVDGICFVSIYVPHPS 38
GVCLL + + +P H+ + + + C S+YV HPS
Sbjct: 3596 GVCLLTSDDVVCGNLADFVPQHAALHPFVVSCIR--CTCSLYVQHPS 3640
>U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta
subunit protein 3 protein.
Length = 204
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -3
Query: 244 LKPDFVFKIPGYS---CLREDRADGYGGVCLLI 155
+KPD +F+ S CL D A G+G V I
Sbjct: 157 MKPDELFEATAQSILSCLERDAASGWGAVVYTI 189
>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
substrate homologprotein 1 protein.
Length = 1003
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 38 GGMRDIDRDKTDTINNSCNDRKAVTM*REREGRKGAR 148
GG D DR+K + +N+ DR+ M +R+ AR
Sbjct: 753 GGSFDYDREKREKEDNNRRDREKAAMDLKRKEEWEAR 789
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 26 EDLQGGMRDIDRDKTDTINNSCNDRKAVTM*REREGRKG 142
ED G + D+DK D D+K +E+E +KG
Sbjct: 169 EDSDGEGDEKDQDKKDKKKQKKKDKKKEKEKKEKEDKKG 207
>AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L
protein.
Length = 480
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 29 DLQGGMRDIDRDKTDTINNSCNDRKAVTM*REREGRKGARVSD 157
D +G RD D+D+ D + DR+ T R R+ + R D
Sbjct: 421 DGRGDRRDRDKDRGDRRKDEKKDRRKRTRSRSRDRKDKNRNRD 463
>AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor
substrate-likeprotein protein.
Length = 1003
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 38 GGMRDIDRDKTDTINNSCNDRKAVTM*REREGRKGAR 148
GG D DR+K + +N+ DR+ M +R+ AR
Sbjct: 753 GGSFDYDREKREKEDNNRRDREKAAMDLKRKEEWEAR 789
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -3
Query: 172 GVCLLIRNSSTFSSFP--LPSHSNCFSVIAAIVDGICFVSIYVPHPS 38
GVCLL + + +P H+ + + + C S+YV HPS
Sbjct: 3596 GVCLLTSDDVVCGNLADFVPQHAALHPFVVSCIR--CTCSLYVQHPS 3640
>AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine
receptor, class h protein82 protein.
Length = 360
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 178 YGGVCLLIRNSSTFSSFPLP 119
+GG C+L +++S S+ LP
Sbjct: 45 FGGYCILFKSTSQMGSYRLP 64
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 26 EDLQGGMRDIDRDKTDTINNSCNDRKAVTM*REREGRKG 142
ED G + D+DK D D+K +E+E +KG
Sbjct: 169 EDSDGEGDEKDQDKKDKKKQKKKDKKKEKEKKEKEDKKG 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,733,317
Number of Sequences: 27780
Number of extensions: 99872
Number of successful extensions: 240
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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