Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40287
         (282 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   0.94 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   1.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   2.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   3.8  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       20   6.7  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              19   8.8  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    19   8.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 0.94
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 60   ETKQIPSTIAAMTEKQLLCEGR 125
            +T QI ST+   T + LLC  R
Sbjct: 1411 DTAQISSTVQKYTLENLLCGSR 1432


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 247 WLKPDFVFKIPGY 209
           WL+PD++F +  Y
Sbjct: 228 WLRPDWLFNLTKY 240


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 239 ARFCIQNPWLFVLKRR 192
           A FC   PW FV+ R+
Sbjct: 289 ASFCKAFPWHFVVDRQ 304


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 235 DFVFKIPGYSCLRED 191
           +F  +IPG+S L +D
Sbjct: 251 EFAKRIPGFSLLAQD 265


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 142 TFSSFPLPSHSNCFSVIAAIV 80
           TF++FP  +H   +S+   I+
Sbjct: 191 TFNAFPTYTHEITYSLFGMIM 211


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -1

Query: 177 MVVYAYSSETLA 142
           ++++ YS+ET+A
Sbjct: 17  LIIFIYSNETIA 28


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -1

Query: 177 MVVYAYSSETLA 142
           ++++ YS+ET+A
Sbjct: 17  LIIFIYSNETIA 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,114
Number of Sequences: 438
Number of extensions: 1281
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)