Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40287
(282 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g01660.1 68418.m00082 kelch repeat-containing protein similar... 29 0.63
At4g03620.1 68417.m00497 myosin heavy chain-related contains wea... 29 0.63
At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 28 0.84
At5g60850.1 68418.m07633 Dof-type zinc finger domain-containing ... 27 2.6
At1g64940.1 68414.m07361 cytochrome P450, putative similar to cy... 27 2.6
At1g16130.1 68414.m01933 wall-associated kinase, putative simila... 27 2.6
At1g09720.1 68414.m01091 kinase interacting family protein simil... 27 2.6
At4g01240.1 68417.m00163 hypothetical protein 26 3.4
At1g10720.1 68414.m01221 BSD domain-containing protein contains ... 26 3.4
At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor, pu... 26 4.5
At4g04700.1 68417.m00690 calcium-dependent protein kinase, putat... 25 5.9
At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) / DNA-... 25 5.9
At3g14460.1 68416.m01832 disease resistance protein (NBS-LRR cla... 25 5.9
At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate 5-ki... 25 5.9
At2g31070.1 68415.m03791 TCP family transcription factor, putati... 25 7.8
>At5g01660.1 68418.m00082 kelch repeat-containing protein similar to
SP|P57790 Kelch-like ECH-associated protein 1 (Cytosolic
inhibitor of Nrf2) {Rattus norvegicus}; contains Pfam
profile PF01344: Kelch motif
Length = 621
Score = 28.7 bits (61), Expect = 0.63
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 82 VDGICFVSIYVPHPSLQIFNEIKNL 8
+DG C VS +PH Q+ +E+K L
Sbjct: 247 IDGSCLVSSPLPHTISQLMHEVKEL 271
>At4g03620.1 68417.m00497 myosin heavy chain-related contains weak
similarity to Swiss-Prot:P24733 myosin heavy chain,
striated muscle [Aequipecten irradians]
Length = 342
Score = 28.7 bits (61), Expect = 0.63
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +3
Query: 66 KQIPSTIAAMTEKQLLCEGRGKEEKVLEFLMSR 164
K++ +++AA Q++C GKE++++ +SR
Sbjct: 164 KELSASMAARKSLQMMCSSLGKEKEIMALELSR 196
>At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 457
Score = 28.3 bits (60), Expect = 0.84
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 153 LMSRHTPPYPSALSSLKHE*PGILNTKSGFSQVS 254
++ RH P S+ SSLKHE P +L+ + S+VS
Sbjct: 10 ILLRHLNPVSSSNSSLKHE-PSLLSPVNCVSEVS 42
>At5g60850.1 68418.m07633 Dof-type zinc finger domain-containing
protein similar to zinc finger protein OBP4 gi:5059396
from [Arabidopsis thaliana]; EMBL:AF155817
Length = 307
Score = 26.6 bits (56), Expect = 2.6
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +2
Query: 38 GGMRDIDRDKTDTINNSCNDRKAVTM*R----EREGRKGARVSDE*AYTTISISPVFS*A 205
GG R R KT + +S + K T E + G+ S E + T S S +
Sbjct: 98 GGCRKAKRSKTKQVPSSSSADKPTTTQDDHHVEEKSSTGSHSSSESSSLTASNSTTVAAV 157
Query: 206 RITRDFEYKIWL*PGFNRENIK 271
+T E + PGF+ N+K
Sbjct: 158 SVTAAAEVASSVIPGFDMPNMK 179
>At1g64940.1 68414.m07361 cytochrome P450, putative similar to
cytochrome p450 GI:438242 from [Solanum melongena]
Length = 511
Score = 26.6 bits (56), Expect = 2.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 163 LLIRNSSTFSSFPLPSHSNCFSVIAAI 83
LL R +FSS PLP N F I +
Sbjct: 20 LLFRRRDSFSSLPLPPDPNFFPFIGTL 46
>At1g16130.1 68414.m01933 wall-associated kinase, putative similar
to putative serine/threonine-specific protein kinase
GI:7270012 from [Arabidopsis thaliana]
Length = 748
Score = 26.6 bits (56), Expect = 2.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 32 LQGGMRDIDRDKTDTINNSCNDRKAVTM 115
L GG D+D K D N C D+ V +
Sbjct: 298 LPGGCVDVDECKLDIGRNQCKDQSCVNL 325
>At1g09720.1 68414.m01091 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 928
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 29 DLQGGMRDIDRDKTDTINNSCNDRKAVTM*REREGRK 139
+LQ +RD+++DK +++S + +K +T+ E E RK
Sbjct: 371 ELQDHIRDVEKDKACLVSDSMDMKKRITV-LEDELRK 406
>At4g01240.1 68417.m00163 hypothetical protein
Length = 659
Score = 26.2 bits (55), Expect = 3.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 271 FYIFSIETWLKPDFVFKIPGYSCLREDRAD 182
F +F + L+P + I G+ CL+ED +D
Sbjct: 588 FVLFDWDRVLRPGGLLWIDGFFCLKEDVSD 617
>At1g10720.1 68414.m01221 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 429
Score = 26.2 bits (55), Expect = 3.4
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 17 NFIEDLQGGMRDIDRDKTDTINNSCNDRKAVTM*RERE--GRKGARVSDE 160
NF+E L G+ D D D NN ND K ER R R+S E
Sbjct: 4 NFLESLYDGIGDDDAADDDEDNN--NDEKTPKASTERHDFSRNAVRLSPE 51
>At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor,
putative (AVDE1) similar to EST gb|N37612
Length = 462
Score = 25.8 bits (54), Expect = 4.5
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 271 FYIFSIETWLKP-DFVFKIPGYSCLREDRADGYGGVCLLIRNS 146
+YI S + KP D++F Y R D DGYGG + R+S
Sbjct: 292 WYILSSKIENKPEDYIFV---YYRGRNDAWDGYGGAVVYTRSS 331
>At4g04700.1 68417.m00690 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423;
contains protein kinase domain, Pfam:PF00069
Length = 485
Score = 25.4 bits (53), Expect = 5.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 73 ICFVSIYVPHPSLQIFNEIKNL 8
+C S +V P Q+FNEIK+L
Sbjct: 226 LCGKSPFVKEPEGQMFNEIKSL 247
>At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) /
DNA-repair protein, putative identical to UV
hypersensitive protein [Arabidopsis thaliana]
gi|13649704|gb|AAK37472; similar to Swiss-Prot:P14629
DNA-repair protein complementing XP-G cells homolog
(Xeroderma pigmentosum group G complementing protein
homolog) [Xenopus laevis]
Length = 1479
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 38 GGMRDIDRDKTDTINNSCNDRKAVTM*REREGRKGARVSDE 160
GG +D D+T N +D + + M E + +KG R ++E
Sbjct: 1406 GGGFCVDEDETAEENTMDDDAEILKMESEEQRKKGKRRNEE 1446
>At3g14460.1 68416.m01832 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1424
Score = 25.4 bits (53), Expect = 5.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 191 VFS*ARITRDFEYKIWL*PGFN 256
VF+ R+T FE K+W+ G N
Sbjct: 213 VFNDYRVTEHFEVKMWISAGIN 234
>At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate
5-kinase, putative / PIP kinase, putative /
PtdIns(4)P-5-kinase, putative / diphosphoinositide
kinase, putative strong similarity to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 754
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 60 ETKQIPSTIAAMTEKQLLCEGRGKEEKVLE 149
E ++ +T + EK LC+ RG EEK E
Sbjct: 9 EEEEEEATEVLLVEKTKLCKRRGDEEKTEE 38
>At2g31070.1 68415.m03791 TCP family transcription factor, putative
similar to TCP1 protein (GI:20269127) {Lupinus albus}
and cycloidea (GI:12002867) [Lycopersicon esculentum]
Length = 361
Score = 25.0 bits (52), Expect = 7.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 169 HHHIHQPCLLLSTNNQ 216
HHH HQP ++ N+Q
Sbjct: 251 HHHHHQPSMMTLLNSQ 266
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,476,750
Number of Sequences: 28952
Number of extensions: 96859
Number of successful extensions: 275
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 12,070,560
effective HSP length: 69
effective length of database: 10,072,872
effective search space used: 241748928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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