Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40286
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   1.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   5.9  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   5.9  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   7.8  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
 Frame = -1

Query: 182 KCPKCDSGQYSFCSTKRH-RAHFGRIP 105
           KC +CD         KRH R H G  P
Sbjct: 213 KCTECDYASVELSKLKRHIRTHTGEKP 239


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 99  TIPKTKASRPNLNRTIPCPKRYPPLS 22
           T PK+ AS  +LN + P     PP S
Sbjct: 512 THPKSSASSTSLNHSNPISSSAPPSS 537


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 99  TIPKTKASRPNLNRTIPCPKRYPPLS 22
           T PK+ AS  +LN + P     PP S
Sbjct: 513 THPKSSASSTSLNHSNPISSSAPPSS 538


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 12  CFGGTKAGTFWGRGWSGLSLAD*LWFSG*CDRDS 113
           C G  + G  W   W G S+A  ++FS   D DS
Sbjct: 156 CIGRGRYGEVWRGIWHGESVAVKIFFSR--DEDS 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,062
Number of Sequences: 2352
Number of extensions: 11264
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)