Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40286
         (614 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC052993-1|AAH52993.1|  392|Homo sapiens family with sequence si...    31   3.2  
BC000259-1|AAH00259.1|  392|Homo sapiens FAM53C protein protein.       31   3.2  
AF251040-1|AAF63766.1|  392|Homo sapiens putative nuclear protei...    31   3.2  

>BC052993-1|AAH52993.1|  392|Homo sapiens family with sequence
           similarity 53, member C protein.
          Length = 392

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -2

Query: 124 HISEESRSHYPENQS*SAKLKPDHPLPQKVPAFVPP 17
           H+   SR + P+ Q  S  L+P+ P P+K+P  VPP
Sbjct: 77  HLRPPSRGNSPKEQPFSQVLRPEPPDPEKLP--VPP 110


>BC000259-1|AAH00259.1|  392|Homo sapiens FAM53C protein protein.
          Length = 392

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -2

Query: 124 HISEESRSHYPENQS*SAKLKPDHPLPQKVPAFVPP 17
           H+   SR + P+ Q  S  L+P+ P P+K+P  VPP
Sbjct: 77  HLRPPSRGNSPKEQPFSQVLRPEPPDPEKLP--VPP 110


>AF251040-1|AAF63766.1|  392|Homo sapiens putative nuclear protein
           protein.
          Length = 392

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -2

Query: 124 HISEESRSHYPENQS*SAKLKPDHPLPQKVPAFVPP 17
           H+   SR + P+ Q  S  L+P+ P P+K+P  VPP
Sbjct: 77  HLRPPSRGNSPKEQPFSQVLRPEPPDPEKLP--VPP 110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,189,132
Number of Sequences: 237096
Number of extensions: 1461233
Number of successful extensions: 2880
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2880
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)