Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40285
(634 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 93 2e-19
02_01_0450 + 3234378-3234834,3235118-3235223,3235722-3235920,323... 31 0.58
01_01_0268 - 2214923-2215048,2215131-2215286,2215371-2215469,221... 31 0.58
04_04_0251 + 23930789-23930960,23931065-23931128,23931641-239317... 31 0.76
08_02_0657 - 19749835-19751942,19753123-19753561 30 1.8
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 30 1.8
01_01_0270 - 2225250-2225263,2225549-2225732,2225817-2225972,222... 30 1.8
02_04_0187 - 20757713-20758632,20759056-20759812 29 2.3
08_02_1311 - 26039741-26039930,26040185-26040316,26040528-260406... 29 3.1
01_01_0886 - 6970112-6970225,6970357-6970473,6970567-6970635,697... 29 3.1
11_06_0511 - 24434007-24436814 29 4.1
06_03_1386 + 29816744-29816941,29817030-29817330,29817421-298175... 29 4.1
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 29 4.1
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 29 4.1
11_06_0634 - 25685216-25685329,25685407-25685511,25685681-256857... 28 5.4
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 28 5.4
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 28 5.4
06_03_1068 - 27341103-27341444,27341689-27341929,27342030-273423... 28 5.4
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 28 5.4
06_01_0876 - 6712224-6712812,6713777-6715233 28 5.4
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 28 5.4
03_02_0971 - 12807981-12808094,12808949-12809053,12809236-128092... 28 5.4
03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306... 28 5.4
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 28 5.4
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 28 5.4
01_06_0763 + 31800556-31800618,31800659-31800802,31800859-318009... 28 5.4
01_06_0221 - 27653591-27653724,27654270-27654473,27655216-276553... 28 5.4
01_01_0939 - 7404209-7404490,7405057-7405368,7405470-7405609,740... 28 5.4
11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 28 7.1
06_03_0772 + 24483314-24486781,24487148-24487240,24488366-24488458 28 7.1
06_01_0860 - 6514921-6515034,6515125-6515196,6515344-6515400,651... 28 7.1
11_06_0325 + 22376195-22377001,22377136-22377525,22377638-223777... 27 9.4
09_02_0226 - 6007656-6008063,6012166-6012678 27 9.4
06_01_0469 + 3322886-3323564,3324033-3324953,3325025-3325155,332... 27 9.4
06_01_0209 + 1587656-1587876,1587964-1588055,1590520-1590545,159... 27 9.4
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 27 9.4
02_04_0175 + 20642877-20643618,20643844-20643955,20644052-206441... 27 9.4
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 27 9.4
01_06_1252 - 35748000-35748173,35748243-35748375,35749771-357498... 27 9.4
01_05_0749 + 24890944-24891146,24891414-24891535,24891633-248917... 27 9.4
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 93.1 bits (221), Expect = 2e-19
Identities = 51/127 (40%), Positives = 81/127 (63%), Gaps = 10/127 (7%)
Frame = -1
Query: 634 DNLVIILRGPPGSGKSYLAKLIRDKEAEHGGTA-RIMSIDDYFC--KKERLEERDPTTG- 467
D++VIILRG PGSGKSYLAK +RD E E+GG A RI S+DDYF ++++E+ + +
Sbjct: 302 DHIVIILRGLPGSGKSYLAKALRDLEVENGGNAPRIHSMDDYFMIEVEKKVEDNEGSKSS 361
Query: 466 ------KTIKKPTLKYEFDKDCEESYVNSLKRAFKRSITDGYFSFLIYDAVNDLHRHYAD 305
K + K ++Y ++ + EE+Y +S+ AFK+++ +G F+F+I D N +A
Sbjct: 362 STSKGRKQLTKKVIEYCYEPEMEETYRSSMLNAFKKTLDEGNFTFVIVDDRNLRVADFAQ 421
Query: 304 IWNFARQ 284
W A++
Sbjct: 422 FWASAKE 428
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -3
Query: 248 DPQVCYKRNIHNRTLEDIEIICTRFFPTPSHHIQLDPTTLLQSAAITDVHMEDVQDEVIA 69
DP C RN+H T++D+ + + P +++LD +L + + +++V E
Sbjct: 468 DPTGCAARNVHGFTVDDVNKMAADWEEAPPLYLRLDIHSLFNDDNLREHSIQEVDMETED 527
Query: 68 DDTRETERNSTEPAN 24
D STE N
Sbjct: 528 TDGASNTATSTEAEN 542
>02_01_0450 +
3234378-3234834,3235118-3235223,3235722-3235920,
3236119-3236187,3236299-3236373,3236484-3236582,
3236694-3236864,3237394-3237519
Length = 433
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 619 ILRGPPGSGKSYLAKLI 569
+L GPPG+GKSYLAK +
Sbjct: 162 LLYGPPGTGKSYLAKAV 178
>01_01_0268 -
2214923-2215048,2215131-2215286,2215371-2215469,
2215557-2215631,2215732-2215800,2216515-2216713,
2220162-2220267,2221117-2221588
Length = 433
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 619 ILRGPPGSGKSYLAKLI 569
+L GPPG+GKSYLAK +
Sbjct: 167 LLYGPPGTGKSYLAKAV 183
>04_04_0251 +
23930789-23930960,23931065-23931128,23931641-23931747,
23931832-23931899,23932068-23932097,23932357-23932460,
23932558-23932662,23932815-23932904,23932982-23933057,
23933292-23933361,23933799-23933869,23933945-23934035,
23934192-23934319,23934547-23934675,23934762-23934902
Length = 481
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 631 NLVIILRGPPGSGKSYLAKLIRDK 560
N +++L GPPG+GK+ L K + K
Sbjct: 216 NRIVLLHGPPGTGKTSLCKALAQK 239
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDKEAEH 548
I+L GPPG+GK+ LA+ I + H
Sbjct: 252 ILLYGPPGTGKTLLARAIAAESGAH 276
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYFCKK 500
++L GPPG+GK+ LAK + A H A I + F +K
Sbjct: 152 VLLYGPPGTGKTMLAKAV----AHHTTAAFIRVVGSEFVQK 188
>01_01_0270 -
2225250-2225263,2225549-2225732,2225817-2225972,
2226276-2226374,2226489-2226563,2226682-2226750,
2226917-2227115,2227492-2227597,2228118-2228526
Length = 436
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -1
Query: 619 ILRGPPGSGKSYLAKLI 569
+L GPPG+GKSYLA+ +
Sbjct: 146 LLYGPPGTGKSYLAEAV 162
>02_04_0187 - 20757713-20758632,20759056-20759812
Length = 558
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 568 RDKEAEHGGTARIMSIDDYFCKKERLEERDPTTGKTIKKP 449
+ K++ GT RI + DYFC KE L+E + T P
Sbjct: 119 KGKQSYFTGTKRIRT-KDYFCSKEGLKEGERLTDANFNDP 157
>08_02_1311 -
26039741-26039930,26040185-26040316,26040528-26040676,
26040807-26040893,26041338-26041420,26042008-26042137
Length = 256
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYFCKKERLEER 482
I+L G GSGK+ L +RD G + +D F LE R
Sbjct: 55 IVLSGLSGSGKTILFYQLRDGSTHQGTVTSMEQNNDTFVLHSELERR 101
>01_01_0886 -
6970112-6970225,6970357-6970473,6970567-6970635,
6970711-6970849,6970964-6971532,6971799-6971966,
6972097-6972184,6972260-6972818,6972924-6973024,
6973113-6973155,6973845-6973938,6974160-6974215,
6974460-6974581,6975306-6975517
Length = 816
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDK 560
I+L GPPG+GK+ LAK I ++
Sbjct: 545 ILLFGPPGTGKTMLAKAIANE 565
>11_06_0511 - 24434007-24436814
Length = 935
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 625 VIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSI 521
VI + G PGSGK++L K + E ++ T+ +SI
Sbjct: 221 VIAVYGQPGSGKTHLVKDVYASEKKYFSTSAWISI 255
>06_03_1386 +
29816744-29816941,29817030-29817330,29817421-29817579,
29818916-29819211,29819534-29819761
Length = 393
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
++L GPPG+GK+ LAK I
Sbjct: 122 VLLYGPPGTGKTMLAKAI 139
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GK+ LAK I
Sbjct: 538 ILLFGPPGTGKTMLAKAI 555
>02_05_0449 -
29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
II +GPPGSGKS L + +
Sbjct: 720 IIFKGPPGSGKSSLCRAV 737
>11_06_0634 - 25685216-25685329,25685407-25685511,25685681-25685740,
25685827-25685965,25686056-25686240,25686328-25686411,
25686499-25686621,25687088-25687267,25687364-25687433,
25687520-25687616,25687695-25687770,25688259-25688348,
25688383-25688529,25688647-25688715,25689004-25689177,
25689266-25689336,25689409-25689557,25690723-25690774,
25690865-25691120,25691196-25691287,25691420-25691541,
25691909-25692679,25692883-25692940,25693068-25693107,
25694462-25694595,25694685-25694793,25694896-25694991
Length = 1220
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GK+ LAK +
Sbjct: 956 ILLFGPPGTGKTMLAKAV 973
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDK 560
I+L GPPGSGK+ +A+ + ++
Sbjct: 247 ILLYGPPGSGKTLIARAVANE 267
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GK+ LAK +
Sbjct: 755 ILLFGPPGTGKTMLAKAV 772
>06_03_1068 -
27341103-27341444,27341689-27341929,27342030-27342343,
27342672-27343805
Length = 676
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
++L GPPG+GK+ LAK I
Sbjct: 250 VLLVGPPGTGKTLLAKAI 267
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDK-EAEHGGTARIMSIDDYFCKKERL 491
++L GPPG+GK+ LA+ I +A ID Y + RL
Sbjct: 178 VLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARL 222
>06_01_0876 - 6712224-6712812,6713777-6715233
Length = 681
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
++L GPPG+GK+ LAK I
Sbjct: 252 VLLVGPPGTGKTLLAKAI 269
>04_04_1163 -
31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
++L GPPG+GK+ LAK +
Sbjct: 693 VLLYGPPGTGKTLLAKAV 710
>03_02_0971 -
12807981-12808094,12808949-12809053,12809236-12809295,
12809399-12809537,12809648-12809832,12809926-12810009,
12810093-12810215,12810617-12810796,12811017-12811092,
12811178-12811277,12811355-12811430,12812155-12812244,
12812342-12812449,12813583-12813651,12813751-12813921,
12814002-12814072,12814263-12814360,12814659-12814719,
12814935-12814971,12815217-12815308,12815428-12815549,
12816281-12816414
Length = 764
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GK+ LAK +
Sbjct: 500 ILLFGPPGTGKTMLAKAV 517
>03_01_0393 -
3062859-3062972,3063027-3063311,3063472-3063759,
3063844-3064161,3064232-3064415,3064504-3064659,
3066394-3066620,3066734-3066804,3067090-3067534
Length = 695
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 625 VIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSI-DDYFCK 503
V+ L GP GSGK+ L ++ + A G +S D+ +CK
Sbjct: 202 VLALMGPSGSGKTTLLSILGGRVAGPGDVEGCVSYNDEPYCK 243
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDK 560
I+L GPPGSGK+ +A+ + ++
Sbjct: 247 ILLYGPPGSGKTLIARAVANE 267
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDK-EAEHGGTARIMSIDDYFCKKERL 491
++L GPPG+GK+ LA+ I +A ID Y + RL
Sbjct: 177 VLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARL 221
>01_06_0763 +
31800556-31800618,31800659-31800802,31800859-31800980,
31801742-31801807,31801891-31801998,31802226-31802292,
31802716-31802800,31803169-31803329,31803490-31803591,
31803807-31804029,31804155-31804300
Length = 428
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GK+ LAK +
Sbjct: 180 ILLFGPPGTGKTMLAKAV 197
>01_06_0221 -
27653591-27653724,27654270-27654473,27655216-27655315,
27655728-27655888,27656846-27656930,27657548-27657614,
27658434-27658541,27658639-27658704,27659341-27659387,
27659497-27659691,27659833-27659877
Length = 403
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GK+ LAK +
Sbjct: 166 ILLFGPPGTGKTMLAKAV 183
>01_01_0939 -
7404209-7404490,7405057-7405368,7405470-7405609,
7406226-7406289,7406378-7406616,7406957-7406983,
7407590-7407749
Length = 407
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 445 LKYEFDKDCEESYVNSLKRAFKRSITDGYFSFLIYDAVNDLHRHY 311
L + + +C S V+S+ R S +DGY F +D V D HY
Sbjct: 91 LVQKHEPECS-SVVSSMTRTEYGSESDGYNLFNQFDVVQDFSDHY 134
>11_03_0227 +
11934530-11934638,11937206-11937351,11937492-11937611,
11937731-11937898,11938534-11938623,11938920-11939018
Length = 243
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDK 560
+IL GPPGSGK + +I+D+
Sbjct: 33 LILVGPPGSGKGTQSPIIKDE 53
>06_03_0772 + 24483314-24486781,24487148-24487240,24488366-24488458
Length = 1217
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -1
Query: 427 KDCEESYVNSL--KRAFKRSITDGYFSFLIYDAVNDLHRH 314
+D + Y N L + F+RS+ D ++++D +NDL R+
Sbjct: 480 EDVAKGYFNDLVQRSFFERSLLDLPIEYVMHDLINDLARN 519
>06_01_0860 -
6514921-6515034,6515125-6515196,6515344-6515400,
6515512-6515650,6515737-6515921,6516043-6516126,
6516552-6516674,6518043-6518219,6518331-6518400,
6518478-6518574,6519022-6519097,6519240-6519329,
6519548-6519655,6520715-6520756,6520854-6521045,
6521239-6521309,6521396-6521550,6521999-6522064,
6522769-6522820,6523476-6523566,6523897-6524094,
6524173-6524267,6524361-6524485,6524586-6525016
Length = 969
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GK+ LAK +
Sbjct: 717 ILLFGPPGTGKTLLAKAL 734
>11_06_0325 +
22376195-22377001,22377136-22377525,22377638-22377778,
22377888-22378067,22378268-22378447,22378536-22378637,
22378768-22378896,22379318-22379422,22379528-22379623
Length = 709
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDKEAEHGG 542
I + GP G GKS L KLI E GG
Sbjct: 462 IAIIGPNGCGKSTLLKLILGMEKTQGG 488
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = -3
Query: 275 PGIRMYNELDPQVCYKRNIHNRTLEDIEIICTRFFPTP---SHHIQLDPTTLLQSAAITD 105
P I +N++ CYK+ +ED++I P+P S I + L + A T
Sbjct: 40 PSIHDHNKIHG--CYKQEKEEEVMEDVDISLQIGLPSPDPNSSVIDFAKSNPLGATATTS 97
Query: 104 VHMEDVQDEVIADDTRETERNSTEPA 27
++ D+ D E ER E A
Sbjct: 98 QELDGDDDD---DHKVEVEREEEEEA 120
>06_01_0469 +
3322886-3323564,3324033-3324953,3325025-3325155,
3325237-3325317,3328173-3328820
Length = 819
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 568 RDKEAEHGGTARIMSIDDYFCKKERLEERDPTTGKTIKKP 449
+ K++ GT I + DY+C KE L+ +P T +P
Sbjct: 68 KGKQSYFIGTKNIRT-KDYYCSKEGLKYDEPVTEANFNRP 106
>06_01_0209 +
1587656-1587876,1587964-1588055,1590520-1590545,
1591130-1591370,1591459-1591554,1591639-1591754,
1591837-1591917,1592597-1592720,1593222-1593271,
1593735-1593825,1594386-1594421,1594502-1594602,
1594684-1594800
Length = 463
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
++L GPPG+GK+ LAK +
Sbjct: 227 LLLFGPPGNGKTMLAKAV 244
>02_05_0752 +
31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
++L GPPG+GK+ LAK +
Sbjct: 722 VLLFGPPGTGKTLLAKAL 739
>02_04_0175 +
20642877-20643618,20643844-20643955,20644052-20644174,
20644258-20644509,20644510-20644639,20644719-20644928,
20645280-20645426
Length = 571
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = -1
Query: 562 KEAEHGGTARIMSIDDYFCKKERLEERDPTTGKTIKKPTLKYEFDKDCEESYVNSLKR 389
K + G ++ +DD+ + ER R P + KP D++ + S NS ++
Sbjct: 503 KRPKIGHVIHMLEVDDFPYRDERRGARAPVQARVADKPVAIEAGDRESDSSGNNSARQ 560
>02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 444 RVGFLIVFPVVGSLSSNLSFLQK*SSIDIILAVPPCSASLSLINLAKYDFP 596
++ FL++ G +S+L+ + S+ D L PC+ SL L YD P
Sbjct: 1302 QIKFLLISQSTGEATSSLASAETTSARDGQLLKMPCNLLRSLKRLCIYDCP 1352
>01_06_1252 -
35748000-35748173,35748243-35748375,35749771-35749847,
35750465-35750509,35750584-35750679,35751125-35751130,
35751259-35751388,35751510-35751706
Length = 285
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 247 SSSLYIRIPGNHSALQSSKYQHNVYGDH*PRRKSEMKSTRRLCFS 381
+S+L + P HS+L S+ Y V G H ++S K T + F+
Sbjct: 234 NSALDWQWPSKHSSLASNFYGTRVVGGHHEYQRSTKKDTTHVNFA 278
>01_05_0749 +
24890944-24891146,24891414-24891535,24891633-24891721,
24891813-24891848,24892268-24892367,24892524-24892566,
24892645-24892739,24892978-24893036,24893114-24893613,
24893691-24893772,24893864-24894429,24894520-24894655,
24894750-24894812,24894942-24895172,24895282-24895395
Length = 812
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
++L GPPG+GK+ LAK +
Sbjct: 506 VLLFGPPGTGKTMLAKAL 523
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,069,992
Number of Sequences: 37544
Number of extensions: 351180
Number of successful extensions: 1177
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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