Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40285
(634 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007792-1|AAH07792.1| 386|Homo sapiens YLPM1 protein protein. 146 4e-35
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein. 146 4e-35
L40403-1|AAC42008.1| 331|Homo sapiens protein ( Homo sapiens (c... 93 6e-19
AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein. 73 6e-13
BC126466-1|AAI26467.1| 1770|Homo sapiens Nedd4 binding protein 2... 38 0.039
AY267013-1|AAP22172.1| 1770|Homo sapiens BCL-3 binding protein p... 38 0.039
AK001542-1|BAA91748.1| 659|Homo sapiens protein ( Homo sapiens ... 38 0.039
AB037834-1|BAA92651.1| 1399|Homo sapiens KIAA1413 protein protein. 38 0.039
S50017-1|AAB24298.2| 421|Homo sapiens 2',3'-cyclic nucleotide 3... 34 0.48
S46849-1|AAB23928.2| 421|Homo sapiens 2',3'-cyclic nucleotide-3... 34 0.48
M19650-1|AAA35704.1| 401|Homo sapiens protein ( Human 2',3'-cyc... 34 0.48
D13146-2|BAA02435.1| 401|Homo sapiens 2',3'-cyclic-nucleotide 3... 34 0.48
D13146-1|BAA39694.1| 421|Homo sapiens 2',3'-cyclic-nucleotide 3... 34 0.48
BC028040-1|AAH28040.1| 421|Homo sapiens 2',3'-cyclic nucleotide... 34 0.48
BC011046-1|AAH11046.1| 401|Homo sapiens CNP protein protein. 34 0.48
BC006392-1|AAH06392.1| 421|Homo sapiens 2',3'-cyclic nucleotide... 34 0.48
BC001362-1|AAH01362.1| 421|Homo sapiens 2',3'-cyclic nucleotide... 34 0.48
BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sortin... 33 0.84
AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing... 33 0.84
AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sortin... 33 0.84
AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein. 33 0.84
U50532-1|AAC50875.1| 583|Homo sapiens unknown protein. 33 1.1
BT007172-1|AAP35836.1| 583|Homo sapiens hypothetical protein fr... 33 1.1
BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sortin... 33 1.1
BC010643-1|AAH10643.1| 583|Homo sapiens phosphonoformate immuno... 33 1.1
AL353665-1|CAI11042.1| 583|Homo sapiens phosphonoformate immuno... 33 1.1
AL049783-1|CAB42441.1| 583|Homo sapiens hypothetical protein pr... 33 1.1
AF530063-1|AAQ09947.1| 583|Homo sapiens phosphonoformate immuno... 33 1.1
AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sortin... 33 1.1
AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sortin... 33 1.1
AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein. 33 1.1
AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protei... 33 1.1
AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein. 33 1.1
U96131-1|AAB64095.1| 432|Homo sapiens HPV16 E1 protein binding ... 31 2.6
CR456744-1|CAG33025.1| 432|Homo sapiens TRIP13 protein. 31 2.6
BC019294-1|AAH19294.1| 432|Homo sapiens thyroid hormone recepto... 31 2.6
BC000404-1|AAH00404.1| 432|Homo sapiens thyroid hormone recepto... 31 2.6
AL137247-3|CAI13192.1| 162|Homo sapiens novel protein protein. 31 3.4
AL137247-2|CAI13191.1| 173|Homo sapiens novel protein protein. 31 3.4
AL137247-1|CAI13190.1| 243|Homo sapiens novel protein protein. 31 3.4
AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein. 31 3.4
BC051828-1|AAH51828.1| 812|Homo sapiens cyclic AMP-regulated ph... 30 7.8
BC036399-1|AAH36399.1| 793|Homo sapiens ARPP-21 protein protein. 30 7.8
>BC007792-1|AAH07792.1| 386|Homo sapiens YLPM1 protein protein.
Length = 386
Score = 146 bits (355), Expect = 4e-35
Identities = 62/129 (48%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
Frame = -1
Query: 634 DNLVIILRGPPGSGKSYLAKLIRDKEAEHGGTA-RIMSIDDYFCKKERLEERDPTTGKTI 458
+ +V+I+RG PGSGK+++AKLIRDKE E GG A R++S+DDYF + EE+DP +GK +
Sbjct: 73 ERIVVIMRGLPGSGKTHVAKLIRDKEVEFGGPAPRVLSLDDYFITEVEKEEKDPDSGKKV 132
Query: 457 KKPTLKYEFDKDCEESYVNSLKRAFKRSITDGYFSFLIYDAVNDLHRHYADIWNFARQNG 278
KK ++YE++ + EE+Y S+ + FK+++ DG+F F+I DA+ND RH+ W+ A+ G
Sbjct: 133 KKKVMEYEYEAEMEETYRTSMFKTFKKTLDDGFFPFIILDAINDRVRHFDQFWSAAKTKG 192
Query: 277 FQVYVCTMS 251
F+VY+ MS
Sbjct: 193 FEVYLAEMS 201
Score = 56.8 bits (131), Expect = 6e-08
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = -3
Query: 248 DPQVCYKRNIHNRTLEDIEIICTRFFPTPSHHIQLDPTTLLQSAAITDVHMEDVQDEVIA 69
D Q C KRNIH R L++I + + P H ++LD +LLQ AAI +V MED +
Sbjct: 203 DNQTCGKRNIHGRKLKEINKMADHWETAPRHMMRLDIRSLLQDAAIEEVEMEDFDANI-- 260
Query: 68 DDTRETERNSTEPANRFGH 12
++ +E ++++ E + G+
Sbjct: 261 EEQKEEKKDAEEEESELGY 279
>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
Length = 1766
Score = 146 bits (355), Expect = 4e-35
Identities = 62/129 (48%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
Frame = -1
Query: 634 DNLVIILRGPPGSGKSYLAKLIRDKEAEHGGTA-RIMSIDDYFCKKERLEERDPTTGKTI 458
+ +V+I+RG PGSGK+++AKLIRDKE E GG A R++S+DDYF + EE+DP +GK +
Sbjct: 1459 ERIVVIMRGLPGSGKTHVAKLIRDKEVEFGGPAPRVLSLDDYFITEVEKEEKDPDSGKKV 1518
Query: 457 KKPTLKYEFDKDCEESYVNSLKRAFKRSITDGYFSFLIYDAVNDLHRHYADIWNFARQNG 278
KK ++YE++ + EE+Y S+ + FK+++ DG+F F+I DA+ND RH+ W+ A+ G
Sbjct: 1519 KKKVMEYEYEAEMEETYRTSMFKTFKKTLDDGFFPFIILDAINDRVRHFDQFWSAAKTKG 1578
Query: 277 FQVYVCTMS 251
F+VY+ MS
Sbjct: 1579 FEVYLAEMS 1587
Score = 56.8 bits (131), Expect = 6e-08
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = -3
Query: 248 DPQVCYKRNIHNRTLEDIEIICTRFFPTPSHHIQLDPTTLLQSAAITDVHMEDVQDEVIA 69
D Q C KRNIH R L++I + + P H ++LD +LLQ AAI +V MED +
Sbjct: 1589 DNQTCGKRNIHGRKLKEINKMADHWETAPRHMMRLDIRSLLQDAAIEEVEMEDFDANI-- 1646
Query: 68 DDTRETERNSTEPANRFGH 12
++ +E ++++ E + G+
Sbjct: 1647 EEQKEEKKDAEEEESELGY 1665
>L40403-1|AAC42008.1| 331|Homo sapiens protein ( Homo sapiens
(clone zap3) mRNA, 3' end of cds. ).
Length = 331
Score = 93.5 bits (222), Expect = 6e-19
Identities = 40/87 (45%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Frame = -1
Query: 634 DNLVIILRGPPGSGKSYLAKLIRDKEAEHGGTA-RIMSIDDYFCKKERLEERDPTTGKTI 458
+ +V+I+RG PGSGK+++ LIRDKE E GG A R++S+DDYF + EE+DP +GK +
Sbjct: 242 ERIVVIMRGLPGSGKTHVXXLIRDKEVEFGGPAPRVLSLDDYFITEVEKEEKDPDSGKKV 301
Query: 457 KKPTLKYEFDKDCEESYVNSLKRAFKR 377
KK ++YE++ + EE+Y S+ + F +
Sbjct: 302 KKKVMEYEYEAEMEETYRTSMFKTFXK 328
>AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein.
Length = 1822
Score = 73.3 bits (172), Expect = 6e-13
Identities = 32/79 (40%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -1
Query: 478 PTTGKT-IKK--PTLKYEFDKDCEESYVNSLKRAFKRSITDGYFSFLIYDAVNDLHRHYA 308
P +GKT + K ++YE++ + EE+Y S+ + FK+++ DG+F F+I DA+ND RH+
Sbjct: 1648 PGSGKTHVAKLIRVMEYEYEAEMEETYRTSMFKTFKKTLDDGFFPFIILDAINDRVRHFD 1707
Query: 307 DIWNFARQNGFQVYVCTMS 251
W+ A+ GF+VY+ MS
Sbjct: 1708 QFWSAAKTKGFEVYLAEMS 1726
Score = 54.0 bits (124), Expect = 4e-07
Identities = 27/72 (37%), Positives = 43/72 (59%)
Frame = -3
Query: 248 DPQVCYKRNIHNRTLEDIEIICTRFFPTPSHHIQLDPTTLLQSAAITDVHMEDVQDEVIA 69
D Q C KRNIH R L++I + + P H ++LD +LLQ AAI +V MED +
Sbjct: 1728 DNQTCGKRNIHGRKLKEINKMADHWETAPRHMMRLDIRSLLQDAAIEEVEMEDFDANI-- 1785
Query: 68 DDTRETERNSTE 33
++ +E ++++ E
Sbjct: 1786 EEQKEEKKDAEE 1797
Score = 38.3 bits (85), Expect = 0.022
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = -1
Query: 634 DNLVIILRGPPGSGKSYLAKLIRDKEAEH 548
+ +V+I+RG PGSGK+++AKLIR E E+
Sbjct: 1638 ERIVVIMRGLPGSGKTHVAKLIRVMEYEY 1666
>BC126466-1|AAI26467.1| 1770|Homo sapiens Nedd4 binding protein 2
protein.
Length = 1770
Score = 37.5 bits (83), Expect = 0.039
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -1
Query: 628 LVIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYF 509
++++LRG PGSGKS+LA+ ++ E + I+S DDYF
Sbjct: 441 VLVLLRGLPGSGKSFLARTLQ----EDNPSGVILSTDDYF 476
>AY267013-1|AAP22172.1| 1770|Homo sapiens BCL-3 binding protein
protein.
Length = 1770
Score = 37.5 bits (83), Expect = 0.039
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -1
Query: 628 LVIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYF 509
++++LRG PGSGKS+LA+ ++ E + I+S DDYF
Sbjct: 441 VLVLLRGLPGSGKSFLARTLQ----EDNPSGVILSTDDYF 476
>AK001542-1|BAA91748.1| 659|Homo sapiens protein ( Homo sapiens
cDNA FLJ10680 fis, clone NT2RP2006573, weakly similar to
2',3'-CYCLIC NUCLEOTIDE 3'-PHOSPHODIESTERASE (EC
3.1.4.37). ).
Length = 659
Score = 37.5 bits (83), Expect = 0.039
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -1
Query: 628 LVIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYF 509
++++LRG PGSGKS+LA+ ++ E + I+S DDYF
Sbjct: 441 VLVLLRGLPGSGKSFLARTLQ----EDNPSGVILSTDDYF 476
>AB037834-1|BAA92651.1| 1399|Homo sapiens KIAA1413 protein protein.
Length = 1399
Score = 37.5 bits (83), Expect = 0.039
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -1
Query: 628 LVIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYF 509
++++LRG PGSGKS+LA+ ++ E + I+S DDYF
Sbjct: 87 VLVLLRGLPGSGKSFLARTLQ----EDNPSGVILSTDDYF 122
>S50017-1|AAB24298.2| 421|Homo sapiens 2',3'-cyclic nucleotide
3'-phosphodiesterase protein.
Length = 421
Score = 33.9 bits (74), Expect = 0.48
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -1
Query: 625 VIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDY 512
+ ILRG PGSGKS LA++I DK + GT +++S D Y
Sbjct: 52 LFILRGLPGSGKSTLARVIVDKYRD--GT-KMVSADAY 86
>S46849-1|AAB23928.2| 421|Homo sapiens 2',3'-cyclic
nucleotide-3'-phosphohydrolase protein.
Length = 421
Score = 33.9 bits (74), Expect = 0.48
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -1
Query: 625 VIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDY 512
+ ILRG PGSGKS LA++I DK + GT +++S D Y
Sbjct: 52 LFILRGLPGSGKSTLARVIVDKYRD--GT-KMVSADAY 86
>M19650-1|AAA35704.1| 401|Homo sapiens protein ( Human 2',3'-cyclic
nucleotide 3'-phosphodiesterase mRNA, complete cds. ).
Length = 401
Score = 33.9 bits (74), Expect = 0.48
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -1
Query: 625 VIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDY 512
+ ILRG PGSGKS LA++I DK + GT +++S D Y
Sbjct: 32 LFILRGLPGSGKSTLARVIVDKYRD--GT-KMVSADAY 66
>D13146-2|BAA02435.1| 401|Homo sapiens 2',3'-cyclic-nucleotide
3'-phosphodiesterase (CNPI) protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.48
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -1
Query: 625 VIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDY 512
+ ILRG PGSGKS LA++I DK + GT +++S D Y
Sbjct: 32 LFILRGLPGSGKSTLARVIVDKYRD--GT-KMVSADAY 66
>D13146-1|BAA39694.1| 421|Homo sapiens 2',3'-cyclic-nucleotide
3'-phosphodiesterase (CNPII) protein.
Length = 421
Score = 33.9 bits (74), Expect = 0.48
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -1
Query: 625 VIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDY 512
+ ILRG PGSGKS LA++I DK + GT +++S D Y
Sbjct: 52 LFILRGLPGSGKSTLARVIVDKYRD--GT-KMVSADAY 86
>BC028040-1|AAH28040.1| 421|Homo sapiens 2',3'-cyclic nucleotide 3'
phosphodiesterase protein.
Length = 421
Score = 33.9 bits (74), Expect = 0.48
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -1
Query: 625 VIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDY 512
+ ILRG PGSGKS LA++I DK + GT +++S D Y
Sbjct: 52 LFILRGLPGSGKSTLARVIVDKYRD--GT-KMVSADAY 86
>BC011046-1|AAH11046.1| 401|Homo sapiens CNP protein protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.48
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -1
Query: 625 VIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDY 512
+ ILRG PGSGKS LA++I DK + GT +++S D Y
Sbjct: 32 LFILRGLPGSGKSTLARVIVDKYRD--GT-KMVSADAY 66
>BC006392-1|AAH06392.1| 421|Homo sapiens 2',3'-cyclic nucleotide 3'
phosphodiesterase protein.
Length = 421
Score = 33.9 bits (74), Expect = 0.48
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -1
Query: 625 VIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDY 512
+ ILRG PGSGKS LA++I DK + GT +++S D Y
Sbjct: 52 LFILRGLPGSGKSTLARVIVDKYRD--GT-KMVSADAY 86
>BC001362-1|AAH01362.1| 421|Homo sapiens 2',3'-cyclic nucleotide 3'
phosphodiesterase protein.
Length = 421
Score = 33.9 bits (74), Expect = 0.48
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -1
Query: 625 VIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDY 512
+ ILRG PGSGKS LA++I DK + GT +++S D Y
Sbjct: 52 LFILRGLPGSGKSTLARVIVDKYRD--GT-KMVSADAY 86
>BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sorting 4
homolog B (S. cerevisiae) protein.
Length = 444
Score = 33.1 bits (72), Expect = 0.84
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSID 518
I+L GPPG+GKSYLAK + EA + I S D
Sbjct: 170 ILLFGPPGTGKSYLAKAVA-TEANNSTFFSISSSD 203
>AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing 1
protein.
Length = 444
Score = 33.1 bits (72), Expect = 0.84
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSID 518
I+L GPPG+GKSYLAK + EA + I S D
Sbjct: 170 ILLFGPPGTGKSYLAKAVA-TEANNSTFFSISSSD 203
>AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sorting
factor 4B protein.
Length = 444
Score = 33.1 bits (72), Expect = 0.84
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSID 518
I+L GPPG+GKSYLAK + EA + I S D
Sbjct: 170 ILLFGPPGTGKSYLAKAVA-TEANNSTFFSISSSD 203
>AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein.
Length = 444
Score = 33.1 bits (72), Expect = 0.84
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSID 518
I+L GPPG+GKSYLAK + EA + I S D
Sbjct: 170 ILLFGPPGTGKSYLAKAVA-TEANNSTFFSISSSD 203
>U50532-1|AAC50875.1| 583|Homo sapiens unknown protein.
Length = 583
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -1
Query: 628 LVIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYF 509
L+I+LRG PGSGK+ L++++ + + + S DDYF
Sbjct: 403 LLILLRGLPGSGKTTLSRILLGQNRD----GIVFSTDDYF 438
>BT007172-1|AAP35836.1| 583|Homo sapiens hypothetical protein from
BCRA2 region protein.
Length = 583
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -1
Query: 628 LVIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYF 509
L+I+LRG PGSGK+ L++++ + + + S DDYF
Sbjct: 403 LLILLRGLPGSGKTTLSRILLGQNRD----GIVFSTDDYF 438
>BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sorting 4
homolog A (S. cerevisiae) protein.
Length = 437
Score = 32.7 bits (71), Expect = 1.1
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GKSYLAK +
Sbjct: 163 ILLFGPPGTGKSYLAKAV 180
>BC010643-1|AAH10643.1| 583|Homo sapiens phosphonoformate
immuno-associated protein 5 protein.
Length = 583
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -1
Query: 628 LVIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYF 509
L+I+LRG PGSGK+ L++++ + + + S DDYF
Sbjct: 403 LLILLRGLPGSGKTTLSRILLGQNRD----GIVFSTDDYF 438
>AL353665-1|CAI11042.1| 583|Homo sapiens phosphonoformate
immuno-associated protein 5 protein.
Length = 583
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -1
Query: 628 LVIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYF 509
L+I+LRG PGSGK+ L++++ + + + S DDYF
Sbjct: 403 LLILLRGLPGSGKTTLSRILLGQNRD----GIVFSTDDYF 438
>AL049783-1|CAB42441.1| 583|Homo sapiens hypothetical protein
protein.
Length = 583
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -1
Query: 628 LVIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYF 509
L+I+LRG PGSGK+ L++++ + + + S DDYF
Sbjct: 403 LLILLRGLPGSGKTTLSRILLGQNRD----GIVFSTDDYF 438
>AF530063-1|AAQ09947.1| 583|Homo sapiens phosphonoformate
immuno-associated protein 5 protein.
Length = 583
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -1
Query: 628 LVIILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYF 509
L+I+LRG PGSGK+ L++++ + + + S DDYF
Sbjct: 403 LLILLRGLPGSGKTTLSRILLGQNRD----GIVFSTDDYF 438
>AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sorting
factor 4A protein.
Length = 437
Score = 32.7 bits (71), Expect = 1.1
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GKSYLAK +
Sbjct: 163 ILLFGPPGTGKSYLAKAV 180
>AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sorting
VPS4-1 protein.
Length = 437
Score = 32.7 bits (71), Expect = 1.1
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GKSYLAK +
Sbjct: 163 ILLFGPPGTGKSYLAKAV 180
>AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein.
Length = 437
Score = 32.7 bits (71), Expect = 1.1
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GKSYLAK +
Sbjct: 163 ILLFGPPGTGKSYLAKAV 180
>AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protein 4
protein.
Length = 432
Score = 32.7 bits (71), Expect = 1.1
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GKSYLAK +
Sbjct: 158 ILLFGPPGTGKSYLAKAV 175
>AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein.
Length = 437
Score = 32.7 bits (71), Expect = 1.1
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 622 IILRGPPGSGKSYLAKLI 569
I+L GPPG+GKSYLAK +
Sbjct: 163 ILLFGPPGTGKSYLAKAV 180
>U96131-1|AAB64095.1| 432|Homo sapiens HPV16 E1 protein binding
protein protein.
Length = 432
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 631 NLVIILRGPPGSGKSYLAKLIRDK 560
N V++L GPPG+GK+ L K + K
Sbjct: 172 NRVVLLHGPPGTGKTSLCKALAQK 195
>CR456744-1|CAG33025.1| 432|Homo sapiens TRIP13 protein.
Length = 432
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 631 NLVIILRGPPGSGKSYLAKLIRDK 560
N V++L GPPG+GK+ L K + K
Sbjct: 172 NRVVLLHGPPGTGKTSLCKALAQK 195
>BC019294-1|AAH19294.1| 432|Homo sapiens thyroid hormone receptor
interactor 13 protein.
Length = 432
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 631 NLVIILRGPPGSGKSYLAKLIRDK 560
N V++L GPPG+GK+ L K + K
Sbjct: 172 NRVVLLHGPPGTGKTSLCKALAQK 195
>BC000404-1|AAH00404.1| 432|Homo sapiens thyroid hormone receptor
interactor 13 protein.
Length = 432
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 631 NLVIILRGPPGSGKSYLAKLIRDK 560
N V++L GPPG+GK+ L K + K
Sbjct: 172 NRVVLLHGPPGTGKTSLCKALAQK 195
>AL137247-3|CAI13192.1| 162|Homo sapiens novel protein protein.
Length = 162
Score = 31.1 bits (67), Expect = 3.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -1
Query: 619 ILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYFCKKERLEERDP 476
+LRG PGSGK+ LA+ ++ A I S DD+F +++ E +P
Sbjct: 23 LLRGLPGSGKTTLARQLQHDFPR----ALIFSTDDFFFREDGAYEFNP 66
>AL137247-2|CAI13191.1| 173|Homo sapiens novel protein protein.
Length = 173
Score = 31.1 bits (67), Expect = 3.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -1
Query: 619 ILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYFCKKERLEERDP 476
+LRG PGSGK+ LA+ ++ A I S DD+F +++ E +P
Sbjct: 46 LLRGLPGSGKTTLARQLQHDFPR----ALIFSTDDFFFREDGAYEFNP 89
>AL137247-1|CAI13190.1| 243|Homo sapiens novel protein protein.
Length = 243
Score = 31.1 bits (67), Expect = 3.4
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -1
Query: 619 ILRGPPGSGKSYLAKLIRDKEAEHGGTARIMSIDDYFCKKERLEERDP 476
+LRG PGSGK+ LA+ ++ A I S DD+F +++ E +P
Sbjct: 46 LLRGLPGSGKTTLARQLQHDFPR----ALIFSTDDFFFREDGAYEFNP 89
>AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein.
Length = 437
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 619 ILRGPPGSGKSYLAKLI 569
+L GPPG+GKSYLAK +
Sbjct: 164 LLFGPPGTGKSYLAKAV 180
>BC051828-1|AAH51828.1| 812|Homo sapiens cyclic AMP-regulated
phosphoprotein, 21 kD protein.
Length = 812
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 499 ERLEERDPTTGKTIKKPTLKYEFDKDCEESYVNS 398
ER +E+D KT +KP ++ KDC + Y +S
Sbjct: 112 EREKEKDKNKDKTSEKPKIRM-LSKDCSQEYTDS 144
>BC036399-1|AAH36399.1| 793|Homo sapiens ARPP-21 protein protein.
Length = 793
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 499 ERLEERDPTTGKTIKKPTLKYEFDKDCEESYVNS 398
ER +E+D KT +KP ++ KDC + Y +S
Sbjct: 112 EREKEKDKNKDKTSEKPKIRM-LSKDCSQEYTDS 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,459,761
Number of Sequences: 237096
Number of extensions: 1996295
Number of successful extensions: 4842
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4839
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -