Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40284
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   4.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.8  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
 Frame = -2

Query: 383 KEQDDSWVTYDE---IIIRRQFNK 321
           K +DD W+ YD+   + ++ QF K
Sbjct: 319 KYKDDQWIGYDDEESVALKVQFAK 342


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 86  GIRRSLLMSYRKIDIVSYID 27
           GI   L++SY  +  V+YID
Sbjct: 201 GISFLLIISYSTLHFVNYID 220


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 369 IVLLLFFRPPP*DTSSKISSTVTTAAP 449
           +VLL F    P + S   S+T+TT  P
Sbjct: 409 VVLLQFQISIPEEASPTNSTTITTQTP 435


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,116
Number of Sequences: 336
Number of extensions: 3710
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)