Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40284
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    24   1.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.6  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 147 IFPFKG*IRIYNREGTPSSYWY 82
           ++PF+G IRI N++     ++Y
Sbjct: 215 VYPFEGDIRIVNKDRRGELFYY 236


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 631 THSTMFTIDFHGEGITSCNKNQTRKI 554
           TH+ +FTI    +G T   K +T+K+
Sbjct: 59  THAPIFTIAVQIDGQTYEGKGRTKKM 84


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 256 YLIVFHTVFAIHRCNLILVHSNLLNCRRIIIS 351
           YL++   +F IH C L L   ++L C   I++
Sbjct: 96  YLLLGKWIFGIHLCKLWLT-CDVLCCTASILN 126


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 256 YLIVFHTVFAIHRCNLILVHSNLLNCRRIIIS 351
           YL++   +F IH C L L   ++L C   I++
Sbjct: 96  YLLLGKWIFGIHLCKLWLT-CDVLCCTASILN 126


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 256 YLIVFHTVFAIHRCNLILVHSNLLNCRRIIIS 351
           YL++   +F IH C L L   ++L C   I++
Sbjct: 96  YLLLGKWIFGIHLCKLWLT-CDVLCCTASILN 126


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
 Frame = -3

Query: 673 GIRISGGYQLF*CN--THSTMFTIDFHGEGITS-------CNKNQTRKIIISVI 539
           G+RI G + L  C+  T+    ++DF    I++       CNK   RK+I  V+
Sbjct: 164 GVRI-GAHILDDCDNDTYGLEMSVDFIKGSISNIDGAEDHCNKTAVRKVISGVV 216


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,031
Number of Sequences: 438
Number of extensions: 5024
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)