Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40283
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35 pro... 89 4e-18
CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein. 89 4e-18
BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35 p... 89 4e-18
BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35 p... 89 4e-18
BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein. 89 4e-18
BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35 p... 89 4e-18
AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35 p... 89 4e-18
AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35 p... 69 6e-12
AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35 p... 53 4e-07
AB076384-1|BAB82982.1| 376|Homo sapiens X box-binding protein s... 28 9.9
>U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 89.4 bits (212), Expect = 4e-18
Identities = 51/110 (46%), Positives = 63/110 (57%)
Frame = +1
Query: 13 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 192
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 193 YHQKMKVNLRNHYKNKKYKPLI*EPRRPVLCARLLLNTKQRSRRGKRSER 342
+Q K NLR YK KKYKPL P++ R LN + + + K+ +R
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKK-TRAMRRRLNKHEENLKTKKQQR 109
Score = 60.1 bits (139), Expect = 3e-09
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 162 KKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFDLRAKKTRAMRKALTKHEAKIKTRKEIRK 341
+KS L ++ + K + ++ + DLR KKTRAMR+ L KHE +KT+K+ RK
Sbjct: 51 RKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
Query: 342 KSLFPPRVYAVKA 380
+ L+P R YAVKA
Sbjct: 111 ERLYPLRKYAVKA 123
>CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein.
Length = 123
Score = 89.4 bits (212), Expect = 4e-18
Identities = 51/110 (46%), Positives = 63/110 (57%)
Frame = +1
Query: 13 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 192
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 193 YHQKMKVNLRNHYKNKKYKPLI*EPRRPVLCARLLLNTKQRSRRGKRSER 342
+Q K NLR YK KKYKPL P++ R LN + + + K+ +R
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKK-TRAMRRRLNKHEENLKTKKQQR 109
Score = 60.1 bits (139), Expect = 3e-09
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 162 KKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFDLRAKKTRAMRKALTKHEAKIKTRKEIRK 341
+KS L ++ + K + ++ + DLR KKTRAMR+ L KHE +KT+K+ RK
Sbjct: 51 RKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
Query: 342 KSLFPPRVYAVKA 380
+ L+P R YAVKA
Sbjct: 111 ERLYPLRKYAVKA 123
>BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 89.4 bits (212), Expect = 4e-18
Identities = 51/110 (46%), Positives = 63/110 (57%)
Frame = +1
Query: 13 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 192
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 193 YHQKMKVNLRNHYKNKKYKPLI*EPRRPVLCARLLLNTKQRSRRGKRSER 342
+Q K NLR YK KKYKPL P++ R LN + + + K+ +R
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKK-TRAMRRRLNKHEENLKTKKQQR 109
Score = 60.1 bits (139), Expect = 3e-09
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 162 KKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFDLRAKKTRAMRKALTKHEAKIKTRKEIRK 341
+KS L ++ + K + ++ + DLR KKTRAMR+ L KHE +KT+K+ RK
Sbjct: 51 RKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
Query: 342 KSLFPPRVYAVKA 380
+ L+P R YAVKA
Sbjct: 111 ERLYPLRKYAVKA 123
>BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 89.4 bits (212), Expect = 4e-18
Identities = 51/110 (46%), Positives = 63/110 (57%)
Frame = +1
Query: 13 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 192
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 193 YHQKMKVNLRNHYKNKKYKPLI*EPRRPVLCARLLLNTKQRSRRGKRSER 342
+Q K NLR YK KKYKPL P++ R LN + + + K+ +R
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKK-TRAMRRRLNKHEENLKTKKQQR 109
Score = 60.1 bits (139), Expect = 3e-09
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 162 KKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFDLRAKKTRAMRKALTKHEAKIKTRKEIRK 341
+KS L ++ + K + ++ + DLR KKTRAMR+ L KHE +KT+K+ RK
Sbjct: 51 RKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
Query: 342 KSLFPPRVYAVKA 380
+ L+P R YAVKA
Sbjct: 111 ERLYPLRKYAVKA 123
>BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein.
Length = 123
Score = 89.4 bits (212), Expect = 4e-18
Identities = 51/110 (46%), Positives = 63/110 (57%)
Frame = +1
Query: 13 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 192
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 193 YHQKMKVNLRNHYKNKKYKPLI*EPRRPVLCARLLLNTKQRSRRGKRSER 342
+Q K NLR YK KKYKPL P++ R LN + + + K+ +R
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKK-TRAMRRRLNKHEENLKTKKQQR 109
Score = 58.8 bits (136), Expect = 6e-09
Identities = 30/73 (41%), Positives = 45/73 (61%)
Frame = +3
Query: 162 KKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFDLRAKKTRAMRKALTKHEAKIKTRKEIRK 341
+KS L ++ + K + ++ + DLR KKTRAMR+ L KHE +KT+K+ RK
Sbjct: 51 RKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
Query: 342 KSLFPPRVYAVKA 380
+ L+P R YAV+A
Sbjct: 111 ERLYPLRKYAVRA 123
>BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 89.4 bits (212), Expect = 4e-18
Identities = 51/110 (46%), Positives = 63/110 (57%)
Frame = +1
Query: 13 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 192
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 193 YHQKMKVNLRNHYKNKKYKPLI*EPRRPVLCARLLLNTKQRSRRGKRSER 342
+Q K NLR YK KKYKPL P++ R LN + + + K+ +R
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKK-TRAMRRRLNKHEENLKTKKQQR 109
Score = 60.1 bits (139), Expect = 3e-09
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 162 KKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFDLRAKKTRAMRKALTKHEAKIKTRKEIRK 341
+KS L ++ + K + ++ + DLR KKTRAMR+ L KHE +KT+K+ RK
Sbjct: 51 RKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
Query: 342 KSLFPPRVYAVKA 380
+ L+P R YAVKA
Sbjct: 111 ERLYPLRKYAVKA 123
>AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 89.4 bits (212), Expect = 4e-18
Identities = 51/110 (46%), Positives = 63/110 (57%)
Frame = +1
Query: 13 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 192
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 193 YHQKMKVNLRNHYKNKKYKPLI*EPRRPVLCARLLLNTKQRSRRGKRSER 342
+Q K NLR YK KKYKPL P++ R LN + + + K+ +R
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKK-TRAMRRRLNKHEENLKTKKQQR 109
Score = 60.1 bits (139), Expect = 3e-09
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 162 KKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFDLRAKKTRAMRKALTKHEAKIKTRKEIRK 341
+KS L ++ + K + ++ + DLR KKTRAMR+ L KHE +KT+K+ RK
Sbjct: 51 RKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
Query: 342 KSLFPPRVYAVKA 380
+ L+P R YAVKA
Sbjct: 111 ERLYPLRKYAVKA 123
>AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35
protein.
Length = 95
Score = 68.9 bits (161), Expect = 6e-12
Identities = 40/80 (50%), Positives = 45/80 (56%)
Frame = +1
Query: 19 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 198
K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V +
Sbjct: 2 KIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVIN 61
Query: 199 QKMKVNLRNHYKNKKYKPLI 258
Q K NLR YK P I
Sbjct: 62 QTQKENLRKFYKAAAGGPCI 81
>AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35
protein.
Length = 33
Score = 52.8 bits (121), Expect = 4e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +1
Query: 103 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 201
LRVAKVTGG ASKLSKIRVVRK+IARV V +Q
Sbjct: 1 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33
>AB076384-1|BAB82982.1| 376|Homo sapiens X box-binding protein
spliced form protein.
Length = 376
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 383 SSFNGIDSRWEERFLSDLFPRL 318
SS G++ WE+ F ++LFP+L
Sbjct: 352 SSLLGVNHSWEDTFANELFPQL 373
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,484,365
Number of Sequences: 237096
Number of extensions: 723494
Number of successful extensions: 2000
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1997
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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