Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40280
(623 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 136 1e-32
02_04_0017 + 18937774-18937864,18938505-18940945 136 1e-32
01_06_0662 + 30987187-30987277,30987825-30990214 136 1e-32
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 124 8e-29
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 111 4e-25
03_05_0511 + 25056018-25059107 71 6e-13
02_04_0148 - 20198407-20201424 71 8e-13
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 44 1e-04
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 41 0.001
07_03_1279 + 25415971-25416540 31 0.56
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 30 1.3
06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027 29 2.3
01_06_0456 + 29521282-29522064 29 4.0
10_08_0621 + 19328357-19329545,19329967-19329986 28 5.2
10_01_0230 - 2433082-2434674 28 5.2
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353... 28 6.9
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 28 6.9
06_01_0707 + 5136210-5136584 27 9.2
03_05_1048 - 29950860-29951396,29951810-29952676 27 9.2
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 136 bits (329), Expect = 1e-32
Identities = 61/85 (71%), Positives = 73/85 (85%)
Frame = +1
Query: 256 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 435
IHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE
Sbjct: 699 IHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEE 758
Query: 436 SQVAGTPMFIVKAYLPVNESFGFTA 510
Q GTP++ +KAYLPV ESFGF++
Sbjct: 759 MQRPGTPLYNIKAYLPVIESFGFSS 783
Score = 130 bits (313), Expect = 1e-30
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +2
Query: 2 KTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAK 181
K R++ L+E++ +D A+KIWCFGPE TGPN++VD KGVQYLNEIKDSVVAGFQWA+K
Sbjct: 614 KVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASK 673
Query: 182 EGVMAEENLRGVRFNIYDVTLHTDA 256
EG +AEEN+RG+ F + DV LH DA
Sbjct: 674 EGALAEENMRGICFEVCDVVLHADA 698
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +3
Query: 501 FYCDLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPTTL 617
F LR+ T GQAFPQCVFDHW ++ DP E S+ L
Sbjct: 781 FSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQL 819
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 136 bits (329), Expect = 1e-32
Identities = 61/85 (71%), Positives = 73/85 (85%)
Frame = +1
Query: 256 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 435
IHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE
Sbjct: 699 IHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEE 758
Query: 436 SQVAGTPMFIVKAYLPVNESFGFTA 510
Q GTP++ +KAYLPV ESFGF++
Sbjct: 759 MQRPGTPLYNIKAYLPVIESFGFSS 783
Score = 130 bits (313), Expect = 1e-30
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +2
Query: 2 KTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAK 181
K R++ L+E++ +D A+KIWCFGPE TGPN++VD KGVQYLNEIKDSVVAGFQWA+K
Sbjct: 614 KVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASK 673
Query: 182 EGVMAEENLRGVRFNIYDVTLHTDA 256
EG +AEEN+RG+ F + DV LH DA
Sbjct: 674 EGALAEENMRGICFEVCDVVLHADA 698
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +3
Query: 501 FYCDLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPTTL 617
F LR+ T GQAFPQCVFDHW ++ DP E S+ +TL
Sbjct: 781 FSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQASTL 819
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 136 bits (329), Expect = 1e-32
Identities = 62/85 (72%), Positives = 72/85 (84%)
Frame = +1
Query: 256 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 435
IHRGGGQIIPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIY VLN++RGHVFEE
Sbjct: 697 IHRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEE 756
Query: 436 SQVAGTPMFIVKAYLPVNESFGFTA 510
Q GTP++ +KAYLPV ESFGFT+
Sbjct: 757 MQRPGTPLYNIKAYLPVIESFGFTS 781
Score = 126 bits (303), Expect = 2e-29
Identities = 57/87 (65%), Positives = 71/87 (81%), Gaps = 2/87 (2%)
Frame = +2
Query: 2 KTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAK 181
K R++ L+E++ +D A+KIWCFGPE TGPNI+VD KGVQYLNEIKDSVVAGFQWA+K
Sbjct: 610 KVRSKILSEEFGWDKDLAKKIWCFGPETTGPNIVVDMCKGVQYLNEIKDSVVAGFQWASK 669
Query: 182 EGVMAEENL--RGVRFNIYDVTLHTDA 256
EG +AEEN+ RG+ F + DV LH+DA
Sbjct: 670 EGALAEENMRGRGICFEVCDVILHSDA 696
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +3
Query: 501 FYCDLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPTTL 617
F LR+ T GQAFP VFDHW++L DP EP ++ TL
Sbjct: 779 FTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTRQLTL 817
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 124 bits (298), Expect = 8e-29
Identities = 55/85 (64%), Positives = 69/85 (81%)
Frame = +2
Query: 2 KTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAK 181
K R + L+E++ +D A+KIW FGPE GPN+LVD KGVQYL+EIKDSVVAGFQWA+K
Sbjct: 624 KERGKILSEEFGWDKDLAKKIWAFGPETKGPNLLVDMCKGVQYLSEIKDSVVAGFQWASK 683
Query: 182 EGVMAEENLRGVRFNIYDVTLHTDA 256
EG +AEEN+RGV F + DVTLH+D+
Sbjct: 684 EGALAEENMRGVCFELCDVTLHSDS 708
Score = 113 bits (272), Expect = 1e-25
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +1
Query: 256 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 435
IHRGGGQ+IPT RR +YA LTA PRLMEP+Y +IQ P+ AVG +YGVLN R G + EE
Sbjct: 709 IHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEE 768
Query: 436 SQVAGTPMFIVKAYLPVNESFGFT 507
S+ GTP+ ++ YLPV +SF FT
Sbjct: 769 SERTGTPLSNLRFYLPVAKSFDFT 792
Score = 46.0 bits (104), Expect = 2e-05
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 513 LRSNTGGQAFPQCVFDHWQVLPGDPCEPQSK 605
LR+ T GQAFPQC+F HWQ + DP + S+
Sbjct: 795 LRAETSGQAFPQCIFHHWQTMRSDPFQEGSE 825
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 111 bits (267), Expect = 4e-25
Identities = 52/83 (62%), Positives = 61/83 (73%)
Frame = +1
Query: 256 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 435
+HRGGGQIIPT RR +Y+ L A PRLMEPVY EIQ P V IY VL+RRRGHV +
Sbjct: 825 LHRGGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTAD 884
Query: 436 SQVAGTPMFIVKAYLPVNESFGF 504
GTP+++VKA+LPV ESFGF
Sbjct: 885 VPKPGTPIYVVKAFLPVIESFGF 907
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Frame = +2
Query: 17 YLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKE 184
+ ++Y++DV AR IW FGPE GPNIL+D + V+ LN +KDS+V GFQW A+E
Sbjct: 741 FFRQRYQWDVLAARSIWAFGPEKQGPNILLDDTLSVEVDKNLLNAVKDSIVQGFQWGARE 800
Query: 185 GVMAEENLRGVRFNIYDVTL 244
G + +E +R V+F I + +
Sbjct: 801 GPLCDEPIRNVKFKILNANI 820
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +3
Query: 501 FYCDLRSNTGGQAFPQCVFDHWQVLPGDPCE 593
F DLR +T GQAF VFDHW ++PGDP +
Sbjct: 907 FETDLRYHTQGQAFCLSVFDHWAIVPGDPLD 937
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 71.3 bits (167), Expect = 6e-13
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +1
Query: 271 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 450
GQ+I + ++ +PRL+E +Y CE+ P +G Y VL+R+R V +E G
Sbjct: 867 GQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEG 926
Query: 451 TPMFIVKAYLPVNESFGFT 507
T +F V AYLPV ES GF+
Sbjct: 927 TSLFTVHAYLPVAESVGFS 945
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 495 VRFYCDLRSNTGGQAFPQCVFDHWQVLPGDP 587
V F +LRS T G A V HW+ +P DP
Sbjct: 942 VGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/79 (43%), Positives = 45/79 (56%)
Frame = +1
Query: 271 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 450
GQII R A +L ++PRL+EP+Y CE+ P +G +Y VL R V +E G
Sbjct: 843 GQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEG 902
Query: 451 TPMFIVKAYLPVNESFGFT 507
T +F V AYL V ES F+
Sbjct: 903 TSLFTVHAYLSVAESSEFS 921
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 513 LRSNTGGQAFPQCVFDHWQVLPGDP 587
LR+ T G A F HW+ +P DP
Sbjct: 924 LRNATAGAASALLAFSHWETVPQDP 948
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +1
Query: 313 LLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNE 492
L A PRL+EP+ E+ PE +G + G LN RRG V G + +V A++P+ E
Sbjct: 644 LRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDAFVPLAE 702
Query: 493 SFGFTA 510
F + +
Sbjct: 703 MFQYVS 708
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 310 CLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 489
C A+P ++EPV E++ P G + G +N+R+G + Q +V ++P+N
Sbjct: 665 CYAAARPVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLN 722
Query: 490 ESFGFT 507
FG++
Sbjct: 723 NMFGYS 728
>07_03_1279 + 25415971-25416540
Length = 189
Score = 31.5 bits (68), Expect = 0.56
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 373 EVAVGGIYGVLNRRRGHVFEESQVAG-TPMFIVKAYLPVNESFGFTAICVPTPADRPSRS 549
+VA G L R R ++ E A T + +V + L NE+FG A+ D P R+
Sbjct: 28 DVAAAGGRDKLTRIRVYMHERFAGANATALAVVPSPLGANEAFGRVAVLDDELRDGPDRA 87
Query: 550 AYSTIGR 570
+ + IGR
Sbjct: 88 SSALIGR 94
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +1
Query: 319 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 498
T +L EP + ++ PE +G + +L +RRG + + ++K +P
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLI 556
Query: 499 G 501
G
Sbjct: 557 G 557
>06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027
Length = 178
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 54 PVRFGALAPRVPAPTSWSIAPKEFSTSMKLRTLLWLDSSGPLRK 185
P R PR+ PTS + P+E +T+ + W D G +R+
Sbjct: 58 PARLRVARPRIQRPTSSHVEPEEVTTASR-----WRDGRGSVRR 96
>01_06_0456 + 29521282-29522064
Length = 260
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 603 CSEVRTGLQGGPANGRIRTAGRPVRRCWNANRSKTER 493
C +G +GG R R AG RRC A+R T R
Sbjct: 15 CYSPASGARGGSRRRRRRPAGTTSRRCSRADRLDTLR 51
>10_08_0621 + 19328357-19329545,19329967-19329986
Length = 402
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 41 DVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEG 187
DVT +R+I P G G I + GV +L S+V F+W G
Sbjct: 322 DVTGSREIRMM-PFGAGRRICAGLNVGVMHLEYFVGSMVMEFEWKEVAG 369
>10_01_0230 - 2433082-2434674
Length = 530
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +2
Query: 41 DVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVR 220
D+T R+I P G G I +L ++VA F+W A EG + + +
Sbjct: 452 DITGTREIRMM-PFGAGRRICPGLGVATLHLEYFVANMVAAFEWRAAEGEAVDVDGEKLE 510
Query: 221 FNI 229
F +
Sbjct: 511 FTV 513
>10_01_0323 +
3530246-3530446,3531091-3531726,3531860-3532018,
3532276-3532569,3557747-3557941,3558875-3559095,
3559190-3559373,3559797-3559973,3561319-3561824,
3561880-3562060
Length = 917
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 238 YIIDVESNTTQILFSHNSFLSGPLESSHNRVLN 140
Y I++ I+ S+N L G LES H+R L+
Sbjct: 644 YAINIAHRRVDIMDSNNYNLIGTLESDHHRALS 676
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 193 HNSFLSGPLESSHNRVLNFIEVLNSF 116
HN L+ +E+SH VL FI +L SF
Sbjct: 183 HNGNLTNRMETSHEEVLPFIFLLLSF 208
>06_01_0707 + 5136210-5136584
Length = 124
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 597 EVRTGLQGGPANGRIRTAGRPVRRCWNANRSKTERLID 484
E R G+ GG +GR +RCW++ R + +ID
Sbjct: 2 EPRVGVNGGAVDGR--------QRCWSSRRQSGDHIID 31
>03_05_1048 - 29950860-29951396,29951810-29952676
Length = 467
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 298 CLYACLLTAQPRLMEPVYLCEIQCPEVAVG 387
C C+LTA PR+M +L E ++ VG
Sbjct: 77 CGRRCVLTANPRMMVEAFLKEYLGADIVVG 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,101,010
Number of Sequences: 37544
Number of extensions: 485073
Number of successful extensions: 1393
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -