Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40280
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    28   0.21 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.64 
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       25   1.5  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    25   2.0  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.6  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   4.5  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   7.9  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 28.3 bits (60), Expect = 0.21
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
 Frame = -3

Query: 243 SVTS*MLNRTPRKFSSAITPSLAAHWNPATTESLISLRY*TPLEQ-----STRMLGPVPS 79
           +VTS +L+R     SSA +P+L+++ +  ++ S   + Y  P +Q       +  GP+PS
Sbjct: 194 AVTSPVLSR----ISSASSPNLSSNGSTLSSPSGSRMEYLLPHQQHPPGAGVQGAGPIPS 249

Query: 78  GPKHQ 64
             KHQ
Sbjct: 250 QQKHQ 254


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +3

Query: 468  EGLPTCQ*VVRFYCDLRSNTGGQAFPQCVFDHWQVLPGDPCE 593
            +G+  C   +   C  + N  G+   +C   +W ++ G+ CE
Sbjct: 897  KGISICD-AINGNCHCKPNVIGRTCNECKNGYWNIVSGNGCE 937


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 19/52 (36%), Positives = 22/52 (42%)
 Frame = +1

Query: 388 GIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAICVPTPADRPS 543
           G  GV      HVF +S       FI   YL V+ES       +P P D PS
Sbjct: 306 GYGGVFEIDDLHVFHDSGRTRLNGFIQHCYLAVSES----GSGIPAPPDTPS 353


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 14  RYLTEKYEYDVTEARKIWCFGPEGTGPNILV 106
           +Y  E++  D    R  +C+ P G GP + +
Sbjct: 418 QYRPERFSPDEVARRDPYCYLPFGEGPRVCI 448


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 444 GRYTYVHCEGLPTC 485
           GRYT  +CE  PTC
Sbjct: 664 GRYTGRYCEKCPTC 677


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 436 TLRKRDHDVCSAHRRYHP 383
           T+ +  H+ CS+H R HP
Sbjct: 385 TVGQWKHEGCSSHERLHP 402


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 75  APRVPAPTSWSIAPK-EFSTSMKLRTLLWLDSSGP 176
           +P+ P  T+  I+P  EFS     ++LL L+ +GP
Sbjct: 428 SPKSPTATTHLISPPAEFSNGSS-KSLLLLNGNGP 461


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,064
Number of Sequences: 2352
Number of extensions: 17117
Number of successful extensions: 56
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)