Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40280
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 163 9e-41
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 163 9e-41
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 102 2e-22
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 102 2e-22
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.13
AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 8.2
Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical pr... 27 8.2
AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical ... 27 8.2
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 8.2
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 8.2
AF040655-8|AAB95047.1| 632|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 163 bits (396), Expect = 9e-41
Identities = 74/85 (87%), Positives = 78/85 (91%)
Frame = +1
Query: 256 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 435
IHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVFEE
Sbjct: 708 IHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEE 767
Query: 436 SQVAGTPMFIVKAYLPVNESFGFTA 510
SQV GTPMF+VKAYLPVNESFGFTA
Sbjct: 768 SQVTGTPMFVVKAYLPVNESFGFTA 792
Score = 158 bits (384), Expect = 3e-39
Identities = 67/85 (78%), Positives = 79/85 (92%)
Frame = +2
Query: 2 KTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAK 181
K RA+ L EKYEYDVTEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVVAGFQWA +
Sbjct: 623 KARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATR 682
Query: 182 EGVMAEENLRGVRFNIYDVTLHTDA 256
EGV+++EN+RGVRFN++DVTLH DA
Sbjct: 683 EGVLSDENMRGVRFNVHDVTLHADA 707
Score = 72.9 bits (171), Expect = 2e-13
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3
Query: 501 FYCDLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPTTL 617
F DLRSNTGGQAFPQCVFDHWQVLPGDP E +KP +
Sbjct: 790 FTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQI 828
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 163 bits (396), Expect = 9e-41
Identities = 74/85 (87%), Positives = 78/85 (91%)
Frame = +1
Query: 256 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 435
IHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVFEE
Sbjct: 708 IHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEE 767
Query: 436 SQVAGTPMFIVKAYLPVNESFGFTA 510
SQV GTPMF+VKAYLPVNESFGFTA
Sbjct: 768 SQVTGTPMFVVKAYLPVNESFGFTA 792
Score = 155 bits (375), Expect = 3e-38
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +2
Query: 2 KTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAK 181
K RA+Y EKYEY VTEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVVAGFQWA +
Sbjct: 623 KARAKYPGEKYEYAVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATR 682
Query: 182 EGVMAEENLRGVRFNIYDVTLHTDA 256
EGV+++EN+RGVRFN++DVTLH DA
Sbjct: 683 EGVLSDENMRGVRFNVHDVTLHADA 707
Score = 72.9 bits (171), Expect = 2e-13
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3
Query: 501 FYCDLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPTTL 617
F DLRSNTGGQAFPQCVFDHWQVLPGDP E +KP +
Sbjct: 790 FTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQI 828
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 102 bits (244), Expect = 2e-22
Identities = 43/83 (51%), Positives = 58/83 (69%)
Frame = +1
Query: 256 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 435
++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV +
Sbjct: 805 LYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTD 864
Query: 436 SQVAGTPMFIVKAYLPVNESFGF 504
+ + G+PM+ + AY+PV +SFGF
Sbjct: 865 APMPGSPMYTISAYIPVMDSFGF 887
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = +2
Query: 17 YLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKE 184
+ KY +D+ AR IW FGP+ TGPNIL+D + + L+ +++S+V GFQWA +E
Sbjct: 721 FFQTKYNWDLLAARSIWAFGPDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATRE 780
Query: 185 GVMAEENLRGVRFNIYDVTLHTD 253
G + EE +R V+F + D + T+
Sbjct: 781 GPLCEEPIRQVKFKLLDAAIATE 803
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 501 FYCDLRSNTGGQAFPQCVFDHWQVLPGDPCE 593
F DLR +T GQAF F HWQ++PGDP +
Sbjct: 887 FETDLRIHTQGQAFCMSAFHHWQLVPGDPLD 917
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 102 bits (244), Expect = 2e-22
Identities = 43/83 (51%), Positives = 58/83 (69%)
Frame = +1
Query: 256 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 435
++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV +
Sbjct: 680 LYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTD 739
Query: 436 SQVAGTPMFIVKAYLPVNESFGF 504
+ + G+PM+ + AY+PV +SFGF
Sbjct: 740 APMPGSPMYTISAYIPVMDSFGF 762
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Frame = +2
Query: 17 YLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKE 184
+ KY +D+ AR IW FG + TGPNIL+D + + L+ +++S+V GFQWA +E
Sbjct: 596 FFQTKYNWDLLAARSIWAFGLDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATRE 655
Query: 185 GVMAEENLRGVRFNIYDVTLHTD 253
G + EE +R V+F + D + T+
Sbjct: 656 GPLCEEPIRQVKFKLLDAAIATE 678
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 501 FYCDLRSNTGGQAFPQCVFDHWQVLPGDPCE 593
F DLR +T GQAF F HWQ++PGDP +
Sbjct: 762 FETDLRIHTQGQAFCMSAFHHWQLVPGDPLD 792
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +1
Query: 268 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 447
GGQ++ + A RL+ +Y C + A+G ++ VL++R+ V E
Sbjct: 732 GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINE 791
Query: 448 GTPMFIVKAYLPVNESFGF 504
T +F V + +PV ESF F
Sbjct: 792 ATNLFEVVSLMPVVESFSF 810
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 504 YCD-LRSNTGGQAFPQCVFDHWQVLPGDP 587
+CD LR T G A Q F HWQV+ DP
Sbjct: 810 FCDQLRKFTSGMASAQLQFSHWQVIDEDP 838
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 504 YCD-LRSNTGGQAFPQCVFDHWQVLPGDP 587
+CD LR T G A Q F HWQV+ DP
Sbjct: 621 FCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2A.1 protein.
Length = 382
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 312 TCIQASSSCWNDLATTSMDASVWS 241
TC + +S W D++TT +D +WS
Sbjct: 243 TCTKDNSFEWTDMSTTGIDGFLWS 266
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 138 KLRTLLWLDSSGPLRKELWLKRICVVFDST 227
K++TL+W PL KEL L+R+ V D +
Sbjct: 256 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 285
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 138 KLRTLLWLDSSGPLRKELWLKRICVVFDST 227
K++TL+W PL KEL L+R+ V D +
Sbjct: 270 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 299
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 268 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRR 414
G Q + T RCL A +L + +M + + + A G ++ ++NR+
Sbjct: 1017 GDQTVDKTFRCLMAMMLCCEGIIMSAQFFPQFVGAKSAAGQMFNLINRQ 1065
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 456 YVHCEGLPTCQ*VVRFYCDLRSNTGGQAFPQC--VFDHWQVLPGDPCEP 596
Y H E P+ +F C+ R NT G++ +C +F+ PG P
Sbjct: 299 YGHAESCPSDPVTGQFKCECRHNTCGESCNRCCPLFNQLPWKPGTNSHP 347
>Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical
protein D1054.7 protein.
Length = 113
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 333 TGLSS*QTCIQASSSCWNDLATTSMDASVW 244
TG+ TC + +S W D +TT D +W
Sbjct: 41 TGMMLTATCTKLNSFEWTDGSTTGTDGFIW 70
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 18 ILQKSTNTMLPKPVRFGALAPRVPAPTSWSIAPKEFSTSMKLRTLLWLDSSG 173
I+Q+ +N P P A +PR APT ++ KE S ++ +L + SG
Sbjct: 104 IMQQQSNNQPPSP----AQSPRNAAPTFRALPEKEQSVRLEKSNVLLVGPSG 151
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 18 ILQKSTNTMLPKPVRFGALAPRVPAPTSWSIAPKEFSTSMKLRTLLWLDSSG 173
I+Q+ +N P P A +PR APT ++ KE S ++ +L + SG
Sbjct: 220 IMQQQSNNQPPSP----AQSPRNAAPTFRALPEKEQSVRLEKSNVLLVGPSG 267
>Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical
protein F48C5.1 protein.
Length = 264
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 228 MLNRTPRKFSSAITPSLAAHWNPATT 151
M++ P + S +TP + A+W P T
Sbjct: 169 MISEPPVRVDSVVTPPVCAYWPPVVT 194
>AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical
protein Y102A5C.16 protein.
Length = 200
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 312 TCIQASSSCWNDLATTSMDASVWSVTS 232
TC + +S W D + T DA +W+V +
Sbjct: 134 TCSKTTSFEWTDGSATGSDAFIWNVAT 160
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 456 YVHCEGLPTCQ*VVRFYCDLRSNTGGQAFPQC--VFDHWQVLPGDPCEP 596
Y H E P+ +F C+ R NT G++ +C +F+ PG P
Sbjct: 299 YGHAESCPSDPVTGQFKCECRHNTCGESCNRCCPLFNQLPWKPGTNSHP 347
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 456 YVHCEGLPTCQ*VVRFYCDLRSNTGGQAFPQC--VFDHWQVLPGDPCEP 596
Y H E P+ +F C+ R NT G++ +C +F+ PG P
Sbjct: 299 YGHAESCPSDPVTGQFKCECRHNTCGESCNRCCPLFNQLPWKPGTNSHP 347
>AF040655-8|AAB95047.1| 632|Caenorhabditis elegans Hypothetical
protein T24E12.10 protein.
Length = 632
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 558 DHWQVLPGDPCEPQSKPTTL 617
DH +LP D EPQ+ PT+L
Sbjct: 235 DHDHLLPDDSVEPQNGPTSL 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,313,756
Number of Sequences: 27780
Number of extensions: 384975
Number of successful extensions: 1020
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -