Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40278
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72503-6|CAA96594.4| 273|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical pr... 39 0.002
U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle abno... 37 0.010
S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein. 37 0.010
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 35 0.039
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 35 0.039
AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical... 35 0.039
AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical... 35 0.039
U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical pr... 33 0.12
U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical pr... 33 0.12
AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 32 0.27
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 32 0.27
Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z98853-5|CAB57903.1| 290|Caenorhabditis elegans Hypothetical pr... 31 0.48
AF475094-1|AAL84635.1| 533|Caenorhabditis elegans SRC-1 protein. 31 0.63
AF419171-1|AAN31394.1| 533|Caenorhabditis elegans protein tyros... 31 0.63
AC084161-5|AAK29735.4| 533|Caenorhabditis elegans Src oncogene ... 31 0.63
U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 29 1.9
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 29 2.6
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 28 4.5
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 28 4.5
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 28 4.5
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 28 4.5
>Z72503-6|CAA96594.4| 273|Caenorhabditis elegans Hypothetical
protein C26C6.8 protein.
Length = 273
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +2
Query: 329 DFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSYCAPC--EHHDLKKKL 502
+FT V DE+ V RG V +YR++ W+YV V++ R+ GF+P +YC H KKK+
Sbjct: 41 NFTATVADEISVTRGTTVKAIYRDDQWIYVEVSDGRK-GFVPQTYCKLLLNSKHGEKKKV 99
>Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical
protein F49B2.5 protein.
Length = 507
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 278 IEKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLY-RENDWVYVIVAESRREGFIP 454
I+K +S + V L + DD+L K+ I+ +L + DW + + R G+IP
Sbjct: 50 IDKNQNISQSANFVALFQYDARTDDDLSFKKDDILEILNDTQGDWWFARHKATGRTGYIP 109
Query: 455 HSYCA 469
+Y A
Sbjct: 110 SNYVA 114
>U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle
abnormal protein 5 protein.
Length = 228
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +2
Query: 317 VVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSYCAPCEHHDLKK 496
V HDF DEL KRG + VL ++ D + EGFIP +Y E +
Sbjct: 4 VAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYKAELDGNEGFIPSNYIRMTECNWYLG 63
Query: 497 KLPRVD 514
K+ R D
Sbjct: 64 KITRND 69
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 296 LSPDSKMV-VLHDFTPCVDDELEVKRGQIVNVLYRE--NDWVYVIVAESRREGFIPHSYC 466
++ ++K V L DF P EL KRG ++ ++ ++ N W + + R G P +Y
Sbjct: 152 MNVETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQL---NNRRGIFPSNYV 208
Query: 467 AP 472
P
Sbjct: 209 CP 210
>S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein.
Length = 228
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +2
Query: 317 VVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSYCAPCEHHDLKK 496
V HDF DEL KRG + VL ++ D + EGFIP +Y E +
Sbjct: 4 VAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYKAELDGNEGFIPSNYIRMTECNWYLG 63
Query: 497 KLPRVD 514
K+ R D
Sbjct: 64 KITRND 69
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 296 LSPDSKMV-VLHDFTPCVDDELEVKRGQIVNVLYRE--NDWVYVIVAESRREGFIPHSYC 466
++ ++K V L DF P EL KRG ++ ++ ++ N W + + R G P +Y
Sbjct: 152 MNVETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQL---NNRRGIFPSNYV 208
Query: 467 AP 472
P
Sbjct: 209 CP 210
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 35.1 bits (77), Expect = 0.039
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Frame = +2
Query: 326 HDFTPCVDDELEVKRGQIVNVLYREND-----WVYVIVAESRREGFIPHSY 463
+DF P +++EVK G+++ VL R +D W+ +I +S + G++P +Y
Sbjct: 1470 YDFLPQGSNQVEVKEGEVIGVLQRTDDDGNPEWL-LIKRDSGKVGYVPAAY 1519
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 320 VLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIP 454
V H F+ DEL V G V VL ND WV ++ + G +P
Sbjct: 256 VRHAFSGRQGDELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 35.1 bits (77), Expect = 0.039
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Frame = +2
Query: 326 HDFTPCVDDELEVKRGQIVNVLYREND-----WVYVIVAESRREGFIPHSY 463
+DF P +++EVK G+++ VL R +D W+ +I +S + G++P +Y
Sbjct: 1470 YDFLPQGSNQVEVKEGEVIGVLQRTDDDGNPEWL-LIKRDSGKVGYVPAAY 1519
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 320 VLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIP 454
V H F+ DEL V G V VL ND WV ++ + G +P
Sbjct: 256 VRHAFSGRQGDELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
>AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical
protein Y47G6A.5b protein.
Length = 574
Score = 35.1 bits (77), Expect = 0.039
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 302 PDSKMVVLHD-FTPCVDDELEVKRGQIVNVLYREN-DWVYVIVAESRREGFIPHSYCAPC 475
P+ KM+++ + F E+ V+ G ++ ++ + N +W YV + +GF+P S+
Sbjct: 94 PEEKMLIVENRFLAQTPKEMSVEEGDVLYLIEQSNREWWYVASKSRQFKGFVPKSHVVYA 153
Query: 476 EHHD 487
E+ +
Sbjct: 154 EYRE 157
>AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical
protein Y47G6A.5a protein.
Length = 618
Score = 35.1 bits (77), Expect = 0.039
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 302 PDSKMVVLHD-FTPCVDDELEVKRGQIVNVLYREN-DWVYVIVAESRREGFIPHSYCAPC 475
P+ KM+++ + F E+ V+ G ++ ++ + N +W YV + +GF+P S+
Sbjct: 138 PEEKMLIVENRFLAQTPKEMSVEEGDVLYLIEQSNREWWYVASKSRQFKGFVPKSHVVYA 197
Query: 476 EHHD 487
E+ +
Sbjct: 198 EYRE 201
>U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical
protein F45E1.7a protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 317 VVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSY 463
VVL+D+ P DE+ +++G+++ VL + + S G P SY
Sbjct: 433 VVLYDYAPAEGDEIALRKGEMIEVLTEPDSLGWCTGRVSGNVGLFPASY 481
>U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical
protein F45E1.7b protein.
Length = 495
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 317 VVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSY 463
VVL+D+ P DE+ +++G+++ VL + + S G P SY
Sbjct: 439 VVLYDYAPAEGDEIALRKGEMIEVLTEPDSLGWCTGRVSGNVGLFPASY 487
>AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform b protein.
Length = 648
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 317 VVLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIPHSY 463
+V+H + P DEL++ G +N+L + D W+Y A G+ P SY
Sbjct: 535 LVVHAYQPSQADELQLNIGDSLNILRKMPDGWLYGERAGDGLGGWFPSSY 584
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 317 VVLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIPHSY 463
+V+H + P DEL++ G +N+L + D W+Y A G+ P SY
Sbjct: 1023 LVVHAYQPSQADELQLNIGDSLNILRKMPDGWLYGERAGDGLGGWFPSSY 1072
>Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical
protein C36E8.4 protein.
Length = 548
Score = 31.9 bits (69), Expect = 0.36
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 299 SPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYR-ENDW-VYVIVAESRREGFIPHSYCAP 472
SP + VL+DF P DE+E++ GQ V V R +DW + ++++ P S P
Sbjct: 481 SPPTICRVLYDFEPKHADEIEIREGQCVLVEDRIGDDWLIGHVISQHDNSSIDPRSGRFP 540
Query: 473 CEHHDLKK 496
+ L++
Sbjct: 541 TTYVSLRQ 548
>Z98853-5|CAB57903.1| 290|Caenorhabditis elegans Hypothetical
protein R08A2.5 protein.
Length = 290
Score = 31.5 bits (68), Expect = 0.48
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 409 GLCHSSRISKRRLHTTFI 462
GL H +RISKR LHTTF+
Sbjct: 95 GLWHVTRISKRMLHTTFV 112
>AF475094-1|AAL84635.1| 533|Caenorhabditis elegans SRC-1 protein.
Length = 533
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 293 GLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYREN-DWVYVIVAESRREGFIPHSYCA 469
G +V L+ + D +L ++G + +L N DW YV + + G++P ++ A
Sbjct: 69 GAQERETLVALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTGYVPRNFVA 128
>AF419171-1|AAN31394.1| 533|Caenorhabditis elegans protein tyrosine
kinase protein.
Length = 533
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 293 GLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYREN-DWVYVIVAESRREGFIPHSYCA 469
G +V L+ + D +L ++G + +L N DW YV + + G++P ++ A
Sbjct: 69 GAQERETLVALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTGYVPRNFVA 128
>AC084161-5|AAK29735.4| 533|Caenorhabditis elegans Src oncogene
related protein 1 protein.
Length = 533
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 293 GLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYREN-DWVYVIVAESRREGFIPHSYCA 469
G +V L+ + D +L ++G + +L N DW YV + + G++P ++ A
Sbjct: 69 GAQERETLVALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTGYVPRNFVA 128
>U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical
protein B0336.6 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.84
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 311 KMVVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSYCAP 472
K+ VL+D+ +DEL ++ IV VL + +D Y V + G P +Y P
Sbjct: 416 KVRVLYDYDAAKEDELTLRENAIVYVLKKNDDDWYEGVLDG-VTGLFPGNYVVP 468
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 320 VLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIP 454
V H F+ DEL V G V VL ND WV ++ + G +P
Sbjct: 256 VRHAFSGRQGDELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 320 VLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIP 454
V H F+ DEL V G V VL ND WV ++ + G +P
Sbjct: 256 VRHAFSGRQGDELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 338 PCVDDELEVKRGQIVNVLYRENDWVYV-IVAESRREGFIPHS 460
PC+ +LEV G ++ +L ++ W+ V + + + G++P S
Sbjct: 228 PCLWLDLEVNPGDVIQILSKDEKWMQVRKLGDLTQVGYLPTS 269
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 28.3 bits (60), Expect = 4.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 458 SYCAPCEHHDLKKKLPRVDP 517
+YC P EHH +K L ++ P
Sbjct: 121 NYCPPMEHHGKRKGLAKISP 140
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 28.3 bits (60), Expect = 4.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 458 SYCAPCEHHDLKKKLPRVDP 517
+YC P EHH +K L ++ P
Sbjct: 113 NYCPPMEHHGKRKGLAKISP 132
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 28.3 bits (60), Expect = 4.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 458 SYCAPCEHHDLKKKLPRVDP 517
+YC P EHH +K L ++ P
Sbjct: 121 NYCPPMEHHGKRKGLAKISP 140
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 28.3 bits (60), Expect = 4.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 458 SYCAPCEHHDLKKKLPRVDP 517
+YC P EHH +K L ++ P
Sbjct: 121 NYCPPMEHHGKRKGLAKISP 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,368,394
Number of Sequences: 27780
Number of extensions: 301615
Number of successful extensions: 714
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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